Ureaplasma parvum serovar 3 ATCC 700970: UU257
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Entry
UU257 CDS
T00040
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
uur
Ureaplasma parvum serovar 3 ATCC 700970
Pathway
uur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
uur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UU257 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uur03021
]
UU257 (rpoA)
03400 DNA repair and recombination proteins [BR:
uur03400
]
UU257 (rpoA)
Enzymes [BR:
uur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UU257 (rpoA)
Transcription machinery [BR:
uur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
UU257 (rpoA)
DNA repair and recombination proteins [BR:
uur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
UU257 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AAF30666
UniProt:
Q9PQN4
LinkDB
All DBs
Position
289719..290702
Genome browser
AA seq
327 aa
AA seq
DB search
MRKFLKYQLDVPSINSEDKNRTVVKIAPLEIGFGDTLGNALRRICLSSIPGASMFAVKFG
GYSHEFQPYEGVKEDITHIILNLKNLAIKIDELIYSEDYFNNLLIDKWPKMKINFKGPGV
ITAKDIVCPVGFEIVNQDLYIAEVTKPIDVEIEIFAKTGRGRVDFNTNKDFVSTLHIIAT
DSNYSPVLHYAYNVEMIKDSKSSMSEILTIDIATNGTISGSEAIAIAAKIMQAHLEPIVN
IDKTINEMIIMREREEEEKRQNASISIDDLDLTVRAYNALKQSGINTTAELIELTKSQLE
KIKNLGRKSVTEIIQKLTERSLELKKD
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaatttttaaaataccaacttgatgtgccatcaattaatagcgaagacaaaaat
cgtacagttgttaaaattgccccacttgaaattggttttggtgacacattaggaaatgcc
ttacgtcgaatttgtttatcatcaattcctggtgcctcaatgttcgctgttaaatttggg
ggatattcgcatgaatttcaaccatacgaaggtgttaaagaagacattactcacatcatt
ttaaacttaaaaaatttagcaattaaaattgatgaattaatttatagtgaagactatttc
aacaatttattaattgataaatgaccaaaaatgaaaattaatttcaaaggacctggtgtg
attacagctaaagatattgtatgtccagtaggttttgaaattgttaaccaagacttatat
attgcagaagtaacaaaaccaattgatgtagaaattgaaatttttgcaaaaacaggacgt
ggtcgtgtcgattttaatacaaataaggattttgtttcaacactacatattatcgcaacc
gattcaaattattcaccagttctacattacgcttataatgtagaaatgattaaagattca
aaatcatcaatgtctgagattttaacaattgacattgcaacaaatggtacgatatcagga
agcgaagcaattgcgattgctgctaagattatgcaagcgcatttagaaccaatcgtgaac
attgataaaacaattaatgaaatgattattatgcgtgagcgtgaggaagaagaaaaacgt
caaaacgcttcaatttcaattgatgatttagatttaacggtgcgtgcatataatgcttta
aaacaatcaggtattaataccactgctgaattaattgaattaacaaaatcacaacttgaa
aaaattaagaatttaggacgtaaatcagttactgaaattattcaaaaattaactgaacgt
tcacttgagttaaaaaaagattaa
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