Ureaplasma parvum serovar 3 ATCC 700970: UU582
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Entry
UU582 CDS
T00040
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
uur
Ureaplasma parvum serovar 3 ATCC 700970
Brite
KEGG Orthology (KO) [BR:
uur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uur03019
]
UU582 (deaD)
03009 Ribosome biogenesis [BR:
uur03009
]
UU582 (deaD)
Enzymes [BR:
uur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UU582 (deaD)
Messenger RNA biogenesis [BR:
uur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UU582 (deaD)
Ribosome biogenesis [BR:
uur03009
]
Prokaryotic type
rRNA helicases
UU582 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
PhoH
AAA_22
Arc_C
AAA_19
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AAF30996
UniProt:
Q9PPQ7
LinkDB
All DBs
Position
complement(727817..729148)
Genome browser
AA seq
443 aa
AA seq
DB search
MKFNSNYQKWILDSLINQKIFEPTPIQLKTMPLIAKRENIIGVAPTGTGKTLAFVLPILN
NLDLSQKLQVIIITPTRELARQIFSKIIVFKKHQPLLQVKMLIGGESIDQQINSQLNKSQ
LLIATPTRLKQILTRQILDLHHVNALVFDEADMLMDLGFISDLEFINSQFTNKDVQKISF
SATLHEMLSIQLKKYFKNTKIINISNSIYENKKITHYVIHNHDKWHSLSIIMKTIKPYLC
IIFANTKKEVEAIYQYLIQQNKNVCILHGSLLQRERKNNYRDIKNNKFQYVVASDIASRG
LDIDGVSHIINWNLPTENEWYIHRAGRSGRGKYSGESYVLYDQKEHDKLLNLSKKGIVFH
HKFIKENELFDKEFLFKKKNQFKDLKTQNEIQKIISTTSTKIKPGYKKKIKEAIQKINQK
NKRSHIEKKMNAHRIRGYKLKNS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaatagtaattatcaaaaatgaattcttgattcattaattaaccaaaaaatt
ttcgaaccaacacctattcaattaaaaacgatgccattaatcgctaaaagagaaaatatt
attggcgttgcaccaacagggacagggaaaactttagcctttgttttgcctatattaaac
aacttagatttatctcaaaaactgcaagttataattattactcccactcgtgagttagct
cgccaaatttttagtaaaattattgtttttaaaaaacatcaaccacttttacaagttaaa
atgttaattggtggtgaaagtattgaccagcaaattaattcacaattaaataaaagccaa
ctgcttattgcaactccaacgcgtctaaaacaaattttaacacgacaaattcttgattta
caccatgttaatgcacttgtttttgatgaagctgatatgttaatggatcttggttttatt
agtgatttagagtttattaactcacaatttacaaataaagatgtacagaaaataagtttt
agcgctacactgcacgaaatgttatcgatccaattaaaaaaatattttaaaaatacaaag
attattaatattagtaattcaatttatgaaaataaaaaaataacccattatgttattcat
aatcacgacaaatgacattcattatctataattatgaagactattaaaccttatttatgt
atcatttttgcaaatacaaaaaaagaagttgaagcaatttatcaatatttaattcaacaa
aataaaaatgtttgcattttgcatggctcactacttcaacgtgaacgaaaaaacaactat
cgtgatattaaaaataataaatttcagtatgttgttgcctcagatattgcaagtcgtggt
ttagatattgatggtgtaagtcatattattaattgaaatttgcctactgaaaatgaatga
tacattcaccgtgcaggacgtagtggtcgtggtaaatatagtggagaatcatatgtttta
tatgatcaaaaagaacatgataagttattgaatttatcaaaaaaaggaatcgtctttcac
cataaattcattaaagaaaatgagttatttgataaagaatttctttttaagaaaaaaaat
caatttaaagatttaaaaacacaaaatgaaattcaaaaaataatctcaacaacaagtaca
aaaataaaaccaggatataaaaagaaaattaaagaagctattcaaaaaattaatcaaaaa
aacaaacgctctcatatcgaaaagaaaatgaatgctcaccgaattcgtggatataaatta
aaaaatagttaa
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