Ureaplasma parvum serovar 3 ATCC 700970: UU590
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Entry
UU590 CDS
T00040
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
uur
Ureaplasma parvum serovar 3 ATCC 700970
Brite
KEGG Orthology (KO) [BR:
uur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
uur03032
]
UU590 (topA)
03400 DNA repair and recombination proteins [BR:
uur03400
]
UU590 (topA)
Enzymes [BR:
uur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
UU590 (topA)
DNA replication proteins [BR:
uur03032
]
Prokaryotic type
DNA Topoisomerases
UU590 (topA)
DNA repair and recombination proteins [BR:
uur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UU590 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
zf-UDP
Toprim_4
DUF1272
DUF5798
Motif
Other DBs
NCBI-ProteinID:
AAF31004
UniProt:
Q9PPP9
LinkDB
All DBs
Position
complement(738155..740188)
Genome browser
AA seq
677 aa
AA seq
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MQKDLIVVESPNKIKSIQSYLGDSYNVIATCGHLRELAKKSGYDPKTYDLKWEIIKTTNK
KLSKKQQIKTIIDLAKKSNNIYLATDPDREGEAISWHVYDLLPKKDKERVKRITFNEITQ
KAILKSIDEKHDIDFNLVDSQFARRILDRVIGYKLSGLVKKNLHGLSAGRVQSIALLFVV
ERELERRSFVKEEWYQIEGIIEKNIFVSLRKIPYDVELYNQKDNSDSDLKFLHKKDAQRV
IDDLSDIFKVYSIDDLKITKGDVQLPLTTDKLLQIASNNFGWSANKTTLIAQQMFEGLEI
NNQQLALITYPRTDSERLSDDFLQEANAFIENNFGKEYLENFKNKKINRKEVNIQDAHEA
IRPVDINLKPEEIKDYVSLDIYKLYNLVWNKTLSALMKVPTFNKQVIRFINNEYKFYTAY
KTIRTLGYWILDFYKKQRDELEFQPPIINVGDEFKKEKIDLIQKETTPPPYYTEASLIAA
LKNAGVGRPSTYATMATIGTTRGYINKDKSKLIPTELGIKVIQELKEAFPKVISIKFTSE
MEERLDVIANGKLFWKDLVSTFIPIFEEEVKQAYTKIEKVPDEKINRLCPICAHDLLIKR
SRMNTRFIACSNFPTCRFTESLEKPEILNELCPNCSKSLVKRKNRKNKYFIGCTGYPECN
FIRNLDESNNDKNDFNQ
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagatttaatagtagtagagtcaccaaataaaattaaatcaattcagtcttat
ttaggtgatagttataatgtaatagctacatgtggacatttacgtgagctcgcaaaaaaa
tctggttatgatccaaaaacttatgatttaaaatgagaaataataaaaacaacaaataaa
aaattatcgaaaaaacaacaaataaaaacaattattgatttagcaaaaaaatcaaataat
atctatttagcaactgaccctgatcgtgaaggtgaagctattagttgacatgtttatgat
ttattaccaaaaaaagataaagaacgtgttaaaagaataacttttaatgaaataacacag
aaagctattttaaaatctattgatgaaaaacatgatattgattttaatttggtagattcg
caatttgcaagacgaattttagatcgagttattggttataaactttctggattagttaaa
aaaaacttacatggcttatctgctgggcgagtacaatcgatcgctttattatttgtagtt
gagagagagttagaaagacgttcttttgttaaagaagaatgatatcaaattgaaggaata
attgaaaaaaacatttttgtatctttaagaaaaattccctatgatgttgaattatataat
cagaaagataatagcgatagtgatttaaaatttctacacaaaaaagatgcacagcgtgtg
attgatgatttaagtgatatttttaaagtttatagtattgatgatttgaaaatcaccaaa
ggcgatgttcaattaccattaacaactgataaattattacaaatcgcatccaataatttt
ggttgaagtgctaataaaacaactttaatagctcaacaaatgtttgaaggattagaaatt
aataatcagcaattagctttaataacttatccaagaacagatagcgagcgattaagtgat
gattttttacaagaagctaatgcctttattgaaaataattttggtaaagaatatctagaa
aattttaaaaataaaaaaattaatagaaaagaagtaaatattcaagacgcacatgaagca
attcgccctgttgatattaatttaaaacctgaagaaattaaagattatgtttcattagat
atttataagctgtataacttagtttgaaataaaacactatcagctttaatgaaagtgcca
acttttaataagcaagtaattcgttttattaataatgaatataaattttatacagcttat
aaaacaattcgaactttaggatattgaattttagatttttataaaaagcaacgtgatgaa
ttagaattccaacctcctataattaatgttggtgatgaatttaaaaaagaaaagatcgat
ttaatacaaaaagaaactacgccaccgccttattacacagaagcctctttaattgcagcg
ctaaaaaatgccggagtaggtcggccttcaacatatgcaacaatggcaactattggcacc
actaggggttacatcaataaagataagagtaaattaattccaacagaattagggattaaa
gtcatccaagagttaaaagaagcctttccaaaagtgatttctattaaatttacatctgag
atggaagaacgtttagatgttatagctaatggcaaattattttgaaaagatttagttagc
acttttattcctatttttgaagaagaagtaaaacaagcatacactaaaatcgaaaaagtt
cctgatgaaaaaattaatcgattatgtcctatatgtgctcatgatttattgattaaaaga
tctagaatgaacactcggttcattgcgtgttcaaatttccctacatgtcgttttacagaa
tcgttagagaaaccagaaattcttaacgaattatgtcctaactgttcaaaatcattggtt
aaacgtaaaaatcgtaaaaataaatattttattggatgcacaggttatcctgaatgtaat
tttattcgtaatttagatgaatcaaacaatgataaaaacgattttaatcaataa
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