Ustilaginoidea virens: 66060970
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Entry
66060970 CDS
T11247
Symbol
UV8b_00192
Name
(RefSeq) uncharacterized protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
uvi Ustilaginoidea virens
Pathway
uvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
66060970 (UV8b_00192)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uvi03019
]
66060970 (UV8b_00192)
Messenger RNA biogenesis [BR:
uvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
66060970 (UV8b_00192)
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Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
66060970
NCBI-ProteinID:
XP_042993624
UniProt:
A0A8E5ME42
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Position
1:complement(join(1485572..1486092,1486182..1486423,1486491..1486543,1486611..1486790))
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AA seq
331 aa
AA seq
DB search
MSSDMSEHEMEMDEGDDLYEPEEPKVEQETNKNPVSKTEELEEGEEEDESGAMDEDEDDS
DIDIITERKDGTTAAPPTQSKYSDIRNIPQRSTSGESPAKPAAAKRESESKSSNGALNVA
APSADQASAAASKSTIDINANPVYPSAGKPITQVNIDEDLPDNEKPWRKPGTDISDYFNY
GFDEFTWALYAAKQESIRGEFGADSFASNNKKMMEDFHNMMMMGGMGMPGGGSGGGAAMP
GMEGIPPEMQAMMQQMMASGMDPSQIDPSQMSAMFSGMQAGGAGPASQGNQGQNFGGGFG
GNQGGYGYDQGMIAGGGGRGGFGGRGRRGRW
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggacatgtcggaacacgaaatggaaatggacgaaggcgacgacctctacgaa
ccagaggagccaaaagtcgagcaagaaaccaacaagaaccccgtatccaaaacagaagag
ctcgaggagggcgaagaggaggacgagagtggtgcaatggacgaggacgaggacgactcg
gacatcgacattattaccgagcggaaagacggcacaacggccgcgcctcccactcagtca
aagtatagtgacattcgaaatattcctcagcgatcgacgtcgggcgaatcacccgccaaa
cccgcggcagccaagagggagagtgagtccaagtcgtccaacggtgccttgaacgtggca
gccccgagcgcggatcaagcttctgcagccgcgtcaaagtccacgattgacatcaacgcg
aatccggtgtacccaagcgccggcaaacctatcactcaagtgaatattgacgaagatctt
ccagacaatgaaaagccatggaggaagccaggaaccgacatcagcgactacttcaactac
ggctttgacgagttcacctgggctttgtatgccgccaagcaggagagcatccggggagag
tttggagcagactcttttgcgtctaacaacaagaagatgatggaggactttcacaacatg
atgatgatgggcggcatgggcatgcctggtggcggcagcggcgggggggctgcaatgcct
ggtatggagggtataccccccgagatgcaggccatgatgcagcagatgatggcgtcgggc
atggatccttcccagattgatcccagccaaatgagcgccatgttctcgggaatgcaggcc
ggaggtgcgggccctgcaagccaaggaaatcagggacaaaatttcgggggcggattcggt
ggcaaccagggaggctacgggtatgatcaaggcatgattgcgggtggcggtggccgcggt
ggcttcggcggacgaggacgccgaggacgctggtga
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