Ustilaginoidea virens: 66061550
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Entry
66061550 CDS
T11247
Symbol
UV8b_00772
Name
(RefSeq) uncharacterized protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
uvi Ustilaginoidea virens
Pathway
uvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
66061550 (UV8b_00772)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
uvi03041
]
66061550 (UV8b_00772)
03009 Ribosome biogenesis [BR:
uvi03009
]
66061550 (UV8b_00772)
Enzymes [BR:
uvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
66061550 (UV8b_00772)
Spliceosome [BR:
uvi03041
]
Complex A
U2 snRNP components
U2 related factors
66061550 (UV8b_00772)
Complex B
66061550 (UV8b_00772)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
66061550 (UV8b_00772)
Ribosome biogenesis [BR:
uvi03009
]
Eukaryotic type
90S particles
Helicases
66061550 (UV8b_00772)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
AAA_19
WHD_HA2
SRP54
Cas3-like_C_2
AAA
NB-ARC
nSTAND3
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
66061550
NCBI-ProteinID:
XP_042994204
UniProt:
A0A8E5MDQ2
LinkDB
All DBs
Position
1:join(3669212..3669534,3669641..3671510,3671771..3671890)
Genome browser
AA seq
770 aa
AA seq
DB search
MSDSYEPKAGKRASADADDSCRKKSKKSDREEKYNPYLAHLDQDSTNGYGDEPPPDSPFS
GLKRRATTATQAAKVEDSAYNPFTGKAHSQQYFKILETRRGLPVHKQRQEFLDKYQSTQI
LVFVGETGSGKTTQIPQYVVYDEMPKMTGKLIACTQPRRVAAMSVAQRVADEMDVSLGEE
VGYSVRFDDCSGPKTLLKYMTDGMLLREAMHDHDMSRYSCIILDEAHERTLATDILMALL
KQIAGRRSDLKIIVMSATLDAQKFQKYFNDAPLLPVPGRTHPVEIFYTPEPERDYVEAAI
RTVLQIHASEDEGDILLFLTGEDEIEDACRKISLEADELQREVDAGPLVVYPLYGTLPPH
QQQKIFDKAPGPLRKGGRPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVE
SLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAFKSELIEQTYPEILRSNLANTVLEL
KKLGVVDLVHFDLMDPPAPETMMRALEELNYLACLDDDGELTTLGGLASEFPLDPSLAVM
LISSPEFYCSNEILSITSLLSVPQIFVRPANNRKRADEMKSHFSHPDGDHLTLLNAYHAF
KGQAASDPDSLKTWCHEHFLSFRHLSSADSVRAQLKRIMETHGLELVSTPFEDKNYYTNI
RRALLSGFFMQVAMRESSGKIYRTVKDEQGVMIHPSTVLRADFDWVLYNEFVLTSKQYIR
TCTGIRPEWLLEIAPVYYDLDTFEQGDIKRSLTRAAEKKRRKEAMKAGRR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactcctacgagcccaaggccggcaaaagagccagcgctgacgctgacgactct
tgtaggaaaaaatccaagaagagcgatcgcgaagaaaagtacaacccgtacctcgcgcac
ttggaccaggacagcacaaacggctacggcgatgagccgcctccggattcgccgttttcc
ggcttgaagcggcgggcaactactgccacgcaggccgccaaggtggaagattccgcctac
aatccatttaccggcaaagcccactcccagcaatactttaaaattctggaaacgcgacgg
ggcttgcccgtccacaagcagagacaagagttcctcgacaagtatcaatcgacgcaaatc
ctcgtctttgtcggagaaacaggttccggcaaaaccacgcaaattcctcagtacgtcgtg
tacgatgaaatgcccaagatgacgggcaagctcattgcctgtacccaacctcgtcgagtg
gccgccatgtcggtcgcgcagcgtgtggcagacgagatggacgtctccctcggcgaagaa
gtcggatacagcgttcgattcgacgactgctccggccccaagacgttgctcaagtacatg
acggatggcatgcttttgcgcgaagccatgcacgaccatgacatgtcgcgctacagctgc
atcattctcgacgaggcgcacgaacgtaccttggccacggatattctcatggcgcttcta
aagcagattgctggccgaagatccgacctcaagatcatcgtcatgtctgccactctggac
gcccaaaagtttcaaaagtacttcaacgacgctccgctgctacccgttcctggtagaacg
catcccgtggagattttttacacgcctgaacctgagcgggactacgtcgaagccgcgatc
cgaaccgtcctgcagatccacgcatcagaagacgagggtgacattctgcttttcctgacc
ggcgaggacgagatcgaggacgcgtgtcgcaagatcagcctggaagccgatgagttgcag
cgagaagtagacgccggccctctcgtcgtgtaccctctgtacggcaccctgcctcctcac
cagcagcagaagatctttgacaaggccccgggcccgttgaggaagggtgggcgaccgggc
cgcaaggttgtcgtgtcgaccaacattgcggagacgtccttgaccattgatggcatcgtt
tacgtggttgatcccggtttcagcaagcaaaagatctacaacccccgcatccgagtagag
tccctgctcgtctcacccatctccaaagcctcggcgcagcaaagagccggtcgtgccggc
cgcacgagaccgggcaaatgtttcaggctgtacacggaaaaggcgttcaagtcggagctc
attgagcagacgtatcccgagattctgcggtccaaccttgccaacacggttctggaactg
aagaagctgggtgtcgtggacctggttcactttgacctcatggacccccccgcgcccgag
accatgatgagggcgctcgaggagctcaactacctcgcctgcctcgacgacgacggcgag
ctcaccacgctgggcggcctggcctccgagttccctctagacccttcattagcggtgatg
ctcatctcctcgcccgagttctactgctccaacgagatcctctccatcacctccctcctc
tcggttccccagatctttgtgcggcccgccaacaaccgcaagcgcgcagacgagatgaag
tcgcactttagccaccccgacggagatcacttgactctcctgaacgcctatcacgccttc
aaaggccaggcggcatccgacccggacagcctgaagacatggtgccacgagcactttctt
tccttccggcacctgtccagcgccgacagcgtccgcgcccagctcaagcgcatcatggag
acgcacggcctggagctcgtctcgacgccgttcgaggacaagaactactacaccaacatt
cgcagggctctgctctcgggcttcttcatgcaggttgccatgagggagagctccggcaag
atttaccgcaccgtcaaggatgagcagggcgtcatgattcacccctccaccgtgctgcga
gccgactttgactgggttctgtacaatgagtttgtgctgacgtcgaagcagtacattcgc
acatgcacaggcatccggcccgagtggctgctggaaattgcccccgtctattacgatctc
gacacctttgagcaaggggacatcaagaggtctcttaccagagcggcggagaagaagagg
agaaaagaagccatgaaagccggacgacgatga
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