Ustilaginoidea virens: 66061733
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Entry
66061733 CDS
T11247
Symbol
UV8b_00955
Name
(RefSeq) uncharacterized protein
KO
K14327
regulator of nonsense transcripts 2
Organism
uvi Ustilaginoidea virens
Pathway
uvi03013
Nucleocytoplasmic transport
uvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
66061733 (UV8b_00955)
03015 mRNA surveillance pathway
66061733 (UV8b_00955)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uvi03019
]
66061733 (UV8b_00955)
Messenger RNA biogenesis [BR:
uvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
66061733 (UV8b_00955)
mRNA cycle factors
P-body specific factors
66061733 (UV8b_00955)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
DUF6247
Motif
Other DBs
NCBI-GeneID:
66061733
NCBI-ProteinID:
XP_042994387
UniProt:
A0A8E5HJP4
LinkDB
All DBs
Position
1:complement(join(4276055..4276072,4276260..4276327,4276391..4276529,4276597..4276905,4276962..4277252,4277320..4277474,4277536..4277827,4277894..4279944,4280043..4280087,4280168..4280186))
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AA seq
1128 aa
AA seq
DB search
MDRQRKRELRELNEKAWDGEKDLFHVGESLDSSLKRNTAFIKRLRTAVTPSNLATFLQEI
RSLSLHKYLSEIIAACYEGLCRVKSPAEIEAGVEIVSALHQRFGPPEFTEYLAWLLGKGM
ATPDKSALKNLTQEVREKEEKERMTRQRALLRVITELWLVGVLRTLDDAVKPEDASKAAT
GKAVELKPRPGSGKAGSAEPFPLEVLKDLLAYDREHTNLPLLVIFVKAFSWEILGVRPAS
SDGRKSIEEDGAASGHNDALPDVDDGAKTAQPADQHPFTPPDTADKFKSILKRYFEDVVA
HIVRDQKSIQSQARRNAEAYVKSGEVFEDRQANYEKQVKTQERLVSNAQVIADAIGAEIP
ELKEPDDSLVTSSGSIGLVKTSEFLRGSGDGNGIWADEDERRFYENIVDLKGKVPPILLE
DGKKKKPDGDDQVGRKVEPNDISDVPKSAPEAVDDQSTSIVNKTIGAQVDALLARLPELT
NKDIIDQTAIDFCFLNSKASRNRLVKALTEVPKGRSDLLPSWARLVATLGRYMPDVPKGL
VDYLDAEFRSLQRRKEKDFLGQVRLSNIRYLAELTKFGVVPEHVVFHCLKVSLDDFSRMN
IEILCNLVENCGRYLLKNPETAPRMASFLETLQRKKSVQHIGQPERMLIDNAVYYVDPPQ
RPAIEQKERTPMELFIRKLVYSDITKRNYSKILKQIRRLHWEEAEVVAILEKVFSKPGRV
KYGNIHLLGILLSALYRYHPEFVVRIIDNVIESVSFGLEQNDFRLYQRRIAEVKYLGELY
NYRVLEHPVIFDTLYKILTFGYGGPPVPGRLNPFDPPDDFFRIRLVATMLETCGMFFDRG
AAGKKLDYFLSFFQYYVHTKISLPMDIEFVVQDTFSMTRPQWKFAANLDEAAKVLQLAIV
QDQKTAGFDRVPEADDVTSGASSDDDNVDVDDAEHDGEGGEDSASEDDEAEQQDVDDESV
NEIDFDEEESIVVTRQEEAVDPEDEAEFEREYAKMMAESLESRKFDRKPLFDVPLPVRPK
NRETPTSTAQEQEPSAPSKKMAFSLLTKKGNRQQTRTVELPSDSTFAIAMITQQQAEKEE
QQRIKNLVLNYDLQQNEDPEGSERGTALYHNRIDRSNKDRGQRVDNVG
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccagaggaagcgcgaactgcgcgagctgaatgagaaagcctgggatggtgag
aaggaccttttccatgtcggcgaatcccttgactcttccttgaaaaggaatacagccttt
ataaaacgcttgcggaccgccgtcaccccttccaacctggcgacatttcttcaagagatc
cgatcactgagcttgcacaaatacctgtccgagatcatagccgcatgttacgagggtctt
tgcagggttaaatcccccgctgagattgaagctggcgttgagattgtaagcgccctacat
caacgcttcggccctcccgagtttaccgaatacctcgcttggctgctgggaaagggcatg
gcgacccccgacaagagtgctctcaagaatcttactcaggaagttcgcgaaaaggaagaa
aaggaaagaatgactcgtcaaagggcccttttgcgagtcattaccgaactgtggttggtt
ggcgttttgagaaccttggacgatgccgtgaagcctgaggacgcaagtaaagccgctaca
gggaaagccgtggagctcaaacctcgaccgggttccggtaaggctggcagcgctgagccc
tttcctctcgaggtcttgaaagacctcctcgcatacgatcgagagcacacaaacctccca
cttctggtgatttttgtcaaggccttcagctgggaaatcttgggtgtgaggcccgccagt
tcggatggacgcaagtccatagaggaggatggtgcggccagcggtcacaatgatgctctt
cccgacgtcgacgacggagccaagacagcacagcctgcggaccaacacccgtttacgcct
cccgatacagcagacaagtttaagagtattctaaagagatatttcgaggatgttgttgca
catattgttcgagatcagaaatcgatacagtctcaagcccgacgaaatgcagaagcttac
gtcaagtctggcgaagtgttcgaggatagacaagcaaattacgagaaacaggtcaagacc
caggaacgattggtttcgaacgctcaagttattgccgacgccattggagccgagatcccg
gaactgaaagaacctgacgactcccttgtgacttcgagtgggtccataggcttggtcaag
actagcgaattcctacgaggctccggcgacggaaacggtatctgggcagatgaagacgaa
cgtcgattctatgaaaacatagttgacctcaagggcaaggtcccccccatcctgttggag
gatggcaagaagaagaaaccagacggcgacgaccaagtgggcaggaaagtcgagcccaat
gacatctccgacgtgccaaagtctgctcccgaggccgttgatgaccagtccacttctatt
gtgaacaagactattggcgctcaagtcgacgcgctacttgcacgcttaccggagctgacc
aataaagatatcatcgaccaaactgccatcgacttttgcttcctcaactcgaaagcatcc
cggaatcgactcgtcaaagctctgacagaggtgcccaagggtcgcagtgacttgctgccg
tcttgggctcgcttggtcgccacgcttggtaggtatatgcctgacgtccccaaggggctt
gttgattatttggacgccgagtttcgaagcttgcagcgcaggaaagaaaaggactttcta
gggcaagtccgcctcagcaatatccgctacctggcggagctcaccaagtttggcgtggtc
cctgagcatgttgtgtttcattgtctcaaggtcagcctcgatgatttttcacgcatgaat
atcgagatcttgtgcaatctggtcgaaaattgtggtaggtatctgctcaaaaatcccgag
accgcgccgcgaatggcaagtttcctcgaaactcttcagcgcaaaaagtctgtgcaacat
attggacagcctgagcgcatgctcattgataatgctgtttattacgttgatccaccgcaa
agaccagcaatcgagcaaaaggagcgcactccaatggaactattcattcggaaactagtg
tatagtgatattacgaaacgaaactacagtaaaatcttgaagcagatccgcaggctacat
tgggaagaagcagaggtcgtcgcaatccttgaaaaggtcttttcgaaacccgggagggtg
aagtacggaaacattcatcttctgggcattcttctgagtgcgctgtatcgttatcacccg
gaattcgtggtcagaatcatcgacaacgtcattgaatctgtcagcttcggcttggagcag
aatgactttcgattgtatcagcgccgtatcgcagaggtgaaataccttggtgagctctac
aattatagagtgctagaacaccccgtcatttttgatactctgtacaaaattcttaccttt
gggtacggggggcctcctgttccaggacgactgaatccgttcgacccaccagatgacttt
ttccgcattcgccttgttgctaccatgttggagacatgcggcatgttttttgatagagga
gctgcgggcaagaagctggactacttcctgtcattttttcagtattacgtccacaccaaa
atctctttgccgatggatattgaatttgtcgttcaagacaccttttcgatgacacgacca
cagtggaaatttgccgcgaaccttgatgaggcagccaaggttcttcaactggccattgta
caggatcaaaaaactgccggcttcgacagggtacccgaggcagatgatgtcaccagtggc
gcatcatcagacgatgataatgtcgatgtagacgatgctgagcatgacggagaaggtggt
gaggatagtgcgtccgaggatgatgaagcagagcagcaggacgtagacgacgaatcggta
aacgagatcgattttgatgaagaagaatcaattgtcgtgactcgccaagaggaagcggtg
gaccctgaagatgaagccgagtttgagcgggaatatgccaaaatgatggctgaaagtctt
gaatctcgcaagttcgaccggaagccactctttgatgttccattgccagtccgaccgaag
aaccgggaaacgcccacgagtacagctcaggaacaagaaccatccgctccaagcaaaaaa
atggcattctcgctgctgacgaagaagggcaaccgacaacagacccggacggtcgagcta
ccatcagactcgacctttgccattgccatgatcacacaacaacaggctgaaaaggaagag
caacagcgtatcaaaaacctagtcttgaattatgatctgcaacagaacgaggacccggaa
ggaagcgagcgaggtacggctctataccacaatcgtatcgaccggtcaaacaaggatcgc
ggccaaagagtggacaacgtcggatga
DBGET
integrated database retrieval system
