Ustilaginoidea virens: 66061769
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Entry
66061769 CDS
T11247
Symbol
UV8b_00991
Name
(RefSeq) uncharacterized protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
uvi Ustilaginoidea virens
Pathway
uvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
66061769 (UV8b_00991)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
uvi03041
]
66061769 (UV8b_00991)
Enzymes [BR:
uvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
66061769 (UV8b_00991)
Spliceosome [BR:
uvi03041
]
Complex C
Other components
Step II factors
66061769 (UV8b_00991)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
S1
WHD_HA2
DEAD
AAA_22
AAA_19
T2SSE
AAA_30
nSTAND3
ABC_tran
nSTAND_NTPase5
PhoH
Cas3-like_C_2
AAA_16
SRP54
TsaE
TrwB_AAD_bind
Motif
Other DBs
NCBI-GeneID:
66061769
NCBI-ProteinID:
XP_042994423
UniProt:
A0A8E5HJT6
LinkDB
All DBs
Position
1:4436193..4439825
Genome browser
AA seq
1210 aa
AA seq
DB search
MDDLLNLELLSLVSKVTSELQNHVGVGDKTLAEFLIAHRLESRDSSDFRNKLDKLGADFP
PSLVDSIDRLVLALHPKFKGENGQANGEEHRHRSRTLQEKEKVFSGLALADREPGNDGGD
AIDDTLALLEGLEGRASKGKDSRKRSRSPDYDKQSRRRRRRDGSGSRERLKQRFRSRSTS
RDGDDQGWRDGFSPSRRQRRGRPRNHVDDDDGDDDYGHRDNGDGDDRLRRTPEPNLDDEP
QLHKVYQGRITGLKDFGAFVRLRHVKGKVDGLVHISRIMAGQRVNHPSDLLSKDQNVWVK
VNSIEGNRIGLSMKDVDQDSGRDLQPQARLTTGANTEALGGGGRNGFADGTTAMPRDALG
APPPHRRRMTSPERWEIRQLIASGVAKAADYPDLEEDYNATLRGDGEMELEQEVDIEVRD
DEPPFLAGQTKQSLELSPIRVVKAPDGSMNRAAMCGTAIAKERKELKQQEADAAAKEKQT
NQNLSSQWHDPMADPDKRTFASDLRSARMHAEPDEVPEWKKAVVPKGQPVGKRTKLSMKE
QRESLPMFAFRSQIIQAVQEHQIMIVVGETGSGKTTQLTQYLAEAGFADRGIIGCTQPRR
VAAMSVAKRVAEEVGCRLGGEVGYLVRFDDCTSAATRIKYMTDGMLQREILMDSDLRRYS
VIMLDEAHERTIATDVLFALLKKAVKRRPDLKIIVTSATLDADKFSSYFNECPIFTIPGR
TFPVEILYSREPESDYLDAALITVMQIHLTEPKGDILLFLTGKEEIDTACEILFERMKAL
GPSVPELLILPVYAQLPAEMQSRIFDPAPPGARKVVIATNIAETSITIDEIYYVVDPGFV
KQNAYDPKLGMDSLVVTPVSQAQANQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTIPEI
QRQNLSHTILMLKAMGINDLLHFDFMDPPPVKTMLTALEELYALSALDDEGLLTRLGRKM
ADFPMDPSSAKVLLAAVDHACSDEALSIIAMLSLQGVVFYRPKEKQAQADQKKAKFHDPH
GDHLTLLNVYNAWKQHAYSSPWCFENFIQARSMRRAKDVRDQLVKIMERYKHPVVSCGRD
TDRVRRALCAGFFRNAARKDPHEGYKTLTEGTTVYLHPSSALFGKHAEWVIYHDLVLTTK
EYMHCTSAIEPKWLVEAAPTFFKVAPSDRLSRRKKTERIQPLYNKFAGEDDWRLSAQRRG
GRGGGGGTWG
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctcttgaatctcgagcttctgtctctcgtatcaaaggtcacgtccgagctc
cagaatcacgtgggtgttggcgacaagaccctggcagagttcctcatcgcccaccggctc
gaaagccgcgactcgagcgatttccgcaacaagctcgacaagctcggcgcagactttccg
ccaagcttggtggacagcatcgaccgcctggtgcttgccctgcaccccaagttcaagggc
gagaacgggcaggccaacggagaggagcatcgacatcgctcgaggacgctgcaggagaaa
gaaaaggttttcagcggcctcgctcttgctgaccgggagcctggaaacgacggcggagat
gccattgacgacaccctggcgctcctggaaggcctggaaggcagagcgagcaaggggaaa
gactcgcgcaagcgcagcagaagtcccgattacgacaagcaatctcggcggcgacggagg
cgagatggctcaggctcgcgtgagcggttgaagcagcgtttccggtcacggtctacatca
cgagatggcgacgaccaaggctggcgagatggattcagcccatctcgaagacaacgacgc
ggccgcccaagaaatcacgtcgatgatgatgatggtgatgatgattatggccaccgcgac
aacggcgacggcgacgatcgattgcgcagaaccccagaacccaacttggacgacgaacct
caactccacaaagtgtatcaaggacgcataacgggtctgaaagattttggcgcctttgtt
cggctgcggcacgtcaagggcaaggtggatggactcgtgcacatatcgagaatcatggcc
gggcagagagtaaaccatccctccgacctgctatcaaaagaccagaacgtttgggtcaaa
gtgaacagcattgaggggaacaggatcggcctatccatgaaggacgtggaccaagactcg
ggccgggatctgcagccgcaggcacgacttaccacaggcgccaacacggaagcccttggc
ggtggcggcaggaacggcttcgcggacggcacaacggcaatgccgcgagatgcgcttgga
gccccgccgcctcataggagaagaatgacgtcgccggagcgatgggaaatacggcagctc
attgcttccggggtagccaaagctgccgactatcccgacctggaggaagattacaacgca
acccttcgcggcgacggcgagatggaactggaacaagaggttgacatcgaagttcgcgac
gacgagccgcccttcctggcggggcagaccaagcaatccctggaactgtccccgatccgc
gtcgtcaaggcacctgatggctccatgaaccgtgcggccatgtgcgggacggcgatagcc
aaggaacgcaaagagctgaagcagcaggaggcagacgcggccgcaaaggagaagcagacg
aaccagaacctgtcgtcccagtggcacgatcccatggccgacccggacaagcgcaccttt
gcgagcgacctgagaagcgcgaggatgcatgccgagccggacgaggttcccgagtggaag
aaggccgtcgtccccaaggggcagccggtcggcaagcgaaccaagctcagcatgaaggag
cagcgcgagtcgctgcccatgttcgccttccgcagccagatcatccaggccgtgcaggag
caccagatcatgatcgtggtcggcgagacggggtcgggcaagacgacgcagctgacgcag
tacctggccgaggcgggcttcgcggacaggggcatcatcgggtgcacgcagccccggagg
gtggccgccatgtcggtcgccaagcgtgtggcggaggaggtcgggtgccggctgggcggc
gaggtcgggtacctggtgcggttcgacgactgcacaagcgccgcgacgaggatcaagtac
atgacggacggaatgctgcagcgcgagatcctcatggactcggacctgaggcggtactcg
gtcatcatgctggacgaggcgcacgagcggaccattgccacggacgtgctgttcgccctg
ctcaagaaggcggtgaagcgccggccggacctcaagatcattgtgacgtcggcgacgctc
gacgccgacaagttctcgtcctacttcaacgagtgccccatcttcacgatccctggccgc
acgttccccgtggagattctgtactcgagggagcccgagtcggactacctggacgcggcg
ctcatcacggtgatgcagatccacctgacggagcccaagggcgacatactgctgttcctg
acgggcaaggaggagattgacacggcgtgcgagatcttgtttgagcgcatgaaggcgctg
gggccgtcggtgccggagctgctgatcctgcccgtgtacgcgcagctgccggcggagatg
cagagccgcatcttcgacccggcgccgccgggggcgcgcaaggtggtcatcgcgaccaac
attgccgagacgtccatcaccattgacgagatctactatgtcgtggacccgggcttcgtc
aagcagaacgcgtacgaccccaagctgggcatggactcgctcgtggtgacgcccgtgtcg
caggcgcaggcgaaccagcgggccgggcgggcgggccgcaccggccccggcaagtgcttc
cggctgtacacggaggcggcgtaccagtcggagatgctgccgacgacgatccccgagatc
cagcggcagaacctgtcgcacacgatcctgatgctcaaggccatgggcatcaacgacctg
ctgcactttgactttatggacccgccgccggtcaagacgatgctgacggcgctcgaggag
ctgtacgcgctcagcgcgctcgacgacgagggcctgctgacgcgcctggggcgcaagatg
gccgacttccccatggacccgtcgtcggccaaggtgctgctggcggccgtggaccacgcc
tgctccgacgaggcgctcagcatcatcgccatgctctccctccagggcgtcgtcttctac
cggcccaaggagaagcaggcgcaggcggaccagaaaaaggcaaagttccacgacccccac
ggcgaccacctgaccctgctcaacgtgtacaacgcgtggaagcagcacgcctactcgagc
ccctggtgcttcgagaacttcatccaggcgcgctcgatgcgccgcgccaaggacgtgcgc
gaccagctcgtcaagatcatggagcgctacaagcaccccgtcgtgtcgtgcggccgcgac
acggaccgcgtgcgccgcgccctctgcgccggcttcttccgcaacgccgcccgcaaggac
ccccacgagggctacaagacgctcaccgagggcaccacggtctacctgcacccgagctcg
gccctgttcggcaagcacgccgagtgggtcatctaccacgacctggtgctcaccaccaag
gagtacatgcactgcacgtcggccatcgagcccaagtggctggtcgaggcggccccgacc
ttcttcaaggtcgccccgagcgacaggctgagcaggcgcaagaagacggagaggatccag
ccgctgtacaacaagtttgccggggaggacgactggcgcctgagcgcgcagcggaggggg
gggcgcggcggcggcggcggcacctggggatga
DBGET
integrated database retrieval system
