Ustilaginoidea virens: 66062292
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Entry
66062292 CDS
T11247
Symbol
UV8b_01514
Name
(RefSeq) uncharacterized protein
KO
K14299
nucleoporin SEH1
Organism
uvi Ustilaginoidea virens
Pathway
uvi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
66062292 (UV8b_01514)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uvi03019
]
66062292 (UV8b_01514)
04131 Membrane trafficking [BR:
uvi04131
]
66062292 (UV8b_01514)
Messenger RNA biogenesis [BR:
uvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
66062292 (UV8b_01514)
Membrane trafficking [BR:
uvi04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
66062292 (UV8b_01514)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
66062292
NCBI-ProteinID:
XP_042994946
UniProt:
A0A8E5HL28
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All DBs
Position
1:complement(join(6582810..6583979,6584102..6584329))
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AA seq
465 aa
AA seq
DB search
MAAASGPASPLSEKLSFDLNLQHGHKDLVQAIAFNTYGDRCATGSVDGKIRVFNRHKDGT
WRLCDTWTAHGGEVLELQWLPATVYPNLVASLGREGWFRLWAEDPAAAPGRRFCSGRSVG
GRPAFDTRSTRAPYRSFSMKHNEDSRHTYLALLATDGRLTVYENDQPENLSEYTCVDEFA
VCAKPSRGEEVSFKVRFDPNPEPCYNALRAGVPVDSLGLVVVGMDAVKVYRSRDTATASL
GVAQAQKEFYLAADIAGHRGLVRDVAWAPGNIRGYDMIATACQDGYARVFRLDTPLPDND
AHPSWSSSRLLRPKHREQQGGGGGGGGGGGGGDAQDPSQLQRQLQLHHASSSSSSAKDDA
AAAAAAAAESKKTLPSTLSASLAKSGSLSHRQWSGQQGQVHHTHREISRLDSHRTPVWRI
GFDDDGQILGSTGDDGKLVFYRQTPDGVWAKSSELVMVKTRMVAP
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcctccggcccagcctcccccctctccgagaagctctccttcgacctcaac
ctccagcacggccacaaagacctcgtccaagccatcgccttcaacacctacggcgaccgc
tgcgccacggggtccgtcgacggcaagatccgcgtcttcaaccgccacaaagacggcacc
tggcgcctctgcgacacctggaccgctcacggcggcgaagtcttggagctccagtggctc
ccggcaaccgtgtaccccaacctcgtcgcctccctcggccgcgagggctggttccgcctc
tgggccgaggacccggccgccgcgcccggccgccgcttctgctcgggacgctccgtcggc
ggccgcccggccttcgacacgcgctccacccgcgcgccctaccgctccttctccatgaag
cacaacgaggactcgcgccacacctacctggccctgctggccaccgacggccgcctcacc
gtctacgaaaacgaccagcccgagaacctgtccgagtacacgtgcgtcgacgagttcgcc
gtgtgcgccaagcccagccgcggcgaggaggtctccttcaaggtgcgcttcgaccccaac
ccggagccgtgctacaacgccctgcgcgccggcgtgcccgtcgactcgctcggcctcgtc
gtcgtcggcatggacgccgtcaaggtctaccgctcgcgcgacaccgccaccgcgtcgctg
ggcgtcgcccaggcccagaaggagttctacctggccgccgacatcgccggccaccgcggc
ctcgtgcgcgacgtcgcctgggccccgggcaacatccgcggctacgacatgatcgccacg
gcctgccaggacggctacgcccgcgtcttcaggctcgacacgcctctccccgacaacgac
gcccacccctcgtggtcttccagccgccttctcaggcccaagcaccgggaacagcaaggt
ggtggtggcggcggtggtggcggcggcggtggtggtgatgcccaggacccgagccagctg
cagcgccagctccagctccaccacgcttcttcttcctcgtcttccgccaaggacgacgcc
gctgccgctgccgctgccgctgccgagagcaaaaagacccttccttccaccctgagcgcc
agccttgccaagtcgggaagcttgagccacaggcagtggtccggccagcaaggacaggtg
caccacacgcatcgagagatatcgcgcctggatagccaccgcacgcccgtctggagaatc
ggctttgacgatgacggccagatcctcggcagcaccggcgatgacggcaagcttgtgttc
tacaggcagacgcccgatggcgtctgggccaagagctcggaattggtcatggtcaagact
cgcatggtggctccttga
DBGET
integrated database retrieval system
