Ustilaginoidea virens: 66062622
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Entry
66062622 CDS
T11247
Symbol
UV8b_01844
Name
(RefSeq) uncharacterized protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
uvi Ustilaginoidea virens
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
uvi03009
]
66062622 (UV8b_01844)
Ribosome biogenesis [BR:
uvi03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
66062622 (UV8b_01844)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
WDR55
Beta-prop_VPS8
Beta-prop_LRRK2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_SCAP
Pep3_Vps18
Motif
Other DBs
NCBI-GeneID:
66062622
NCBI-ProteinID:
XP_042995276
UniProt:
A0A8E5HLQ0
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Position
2:complement(join(341453..342442,342545..342880))
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AA seq
441 aa
AA seq
DB search
MLSEEFLTSICGPPIAANTAISKDVGLYSHSLNPTWAVKATFKKSSAPPHCVAASDTHIF
AAQDQKAHVHVYSRLRGNQEALIAFPERICSLALASNVLVLGTSEGRLILWETCTGRQVT
TPPCHVQAVTCLAVTPYHVLSGSDDSNIHVWSLASLLEFGVDTAQEADLTLSNHRGAITD
LAVGPSTNPETGICVSASADKTCVLWNYHSGQILRTLLFPSVPLCLALDPSARALFASAE
DGGLYFVEFFGNKPLLGSASAELASIVVQVHAPLSVADADYGPASCLAVSYDGTAVLSGH
TKGKILRWNLLDKSHPTELGNLNASVTNIVPIPVLPLSGKPYSTVNVVKPNKSQRQYTIT
CQLEGAMGGESRFSRDLNSTGFPVDRLENAVSMFVSSLKTQSDEKADSDLVKENEELKAI
IAGQKELHETTMRCQEASNTS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgttatccgaagaattcttgacttccatttgcgggcccccaatcgcggcaaacacggca
atctctaaagatgtcggcctttacagccactctctgaatccaacgtgggccgtcaaggct
accttcaagaagagttcagcgccacctcattgtgttgccgcaagcgacacacacatcttc
gccgctcaggaccaaaaggcccacgtacacgtctattcgcgtttgcgtggcaatcaagaa
gcgctgattgctttccccgagcgaatctgcagcctggcgcttgcttcgaatgtcctcgtc
ttgggcacgtccgaggggcgtctgattctgtgggagacgtgcaccggcaggcaggtgacg
actcctccttgccacgttcaagcagtcacttgcttggcagtgacgccgtatcacgttctc
tcgggctccgacgactccaacatccatgtctggtccctcgcaagtctcctcgagtttggg
gtcgatacggcgcaggaggccgacttgaccctgtccaaccaccgtggtgccattactgat
cttgcggtgggaccaagtaccaaccctgaaacgggtatctgtgtatcagccagtgctgac
aagacctgcgtcttgtggaactaccactcgggccaaatactgcgaactcttttgttcccg
tccgtgcctctctgtctcgcactagatccgtcagcacgtgctctatttgccagcgctgag
gatgggggcttgtattttgtcgagttctttggaaacaagccattgcttggctccgcaagt
gcggaactcgcatccattgttgttcaagtccatgctccattaagcgtggctgacgccgat
tatggtccggcttcgtgcttggccgtgagctatgacggcactgctgttttatcgggccat
acaaagggcaagattcttcgttggaacctcttggacaaatcccatcccacggaacttggc
aacctgaatgcatcagtaacaaacattgtacctatcccagtgcttcccctgtccggcaaa
ccatacagtactgtcaacgtggtcaaaccaaacaagagtcagcgacagtataccatcacc
tgtcaactggaaggggccatgggtggcgagtccagattcagccgcgacctcaactcgacg
ggatttcctgtggaccgcctggaaaacgctgtctccatgtttgtatcgtctctgaaaaca
cagtctgacgagaaagcagattcggacctggtcaaggagaatgaagagttaaaggccatt
attgccgggcaaaaggagcttcatgaaactaccatgcgatgccaggaagctagcaatacg
tcatga
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