Ustilaginoidea virens: 66062733
Help
Entry
66062733 CDS
T11247
Symbol
UV8b_01955
Name
(RefSeq) uncharacterized protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
uvi Ustilaginoidea virens
Pathway
uvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
66062733 (UV8b_01955)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
uvi03041
]
66062733 (UV8b_01955)
Spliceosome [BR:
uvi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
66062733 (UV8b_01955)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
PRP4
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_RIG_1st
Beta-prop_SCAP
WDR54
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_RIG_2nd
Tricorn_2nd
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_VPS8
Nbas_N
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
66062733
NCBI-ProteinID:
XP_042995387
UniProt:
A0A063C2U7
LinkDB
All DBs
Position
2:681839..683401
Genome browser
AA seq
520 aa
AA seq
DB search
MMHPSRQAYVEDADSPVGIALEDLKDDQDYDMPTAPGAPPEKTSAILSQFSRKRLAATIA
VPTDDGRVRARLREMGEPVTLFGEGPGDRRDRLRELMTIQAEISGLENADVVMEDAPGVE
ETEEQEEEEFYSRGGEALLEARRRIAEYSLPRAKRRVAFQKQEATIPLRTHVKFRKHVKE
RLQAFELQGSQTVGERHISMTRISPNGELVAVGNWGGQVKLVEIPSLTEKMSFRGHTNKI
SGLSWFPGATLPEKNISSDSVNFASGGAEGLIHLWSLSQDTPVSKLQGHSQRVCRVEFHP
SGRYLASASEDTSWRLWDVETTAETLLQEGHSRGVYAISFNTDGSLLASAGLDSIGRIWD
LRSGRTVMILDGHLDGHIKPIHALDWSSDGHRVLSGSADGWIKCWDVRKVQRTGGIGAHS
SAVSDMRWFKGCDDPLAGTPPGVDDKGAQIPKKSSTFFISSGFDKNVKIFSADDWTLVQT
LSGHTGPVASVDYSRDGKWIVSGGHDRTVKLWGRNDGESL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgatgcatccatcgcgccaggcatatgtggaggacgccgactcaccagtcggcattgcc
ctcgaggacctcaaagatgatcaagactacgatatgccgacggcacccggtgcaccgccc
gagaagacttccgcaatactgagccagttcagcaggaagcgcctcgcggctacaattgcc
gtgcccaccgacgacgggcgcgtgcgcgcaaggctcagggaaatgggagagcccgtcacc
ctgttcggggagggtcctggggatcgtcgtgaccgtctgcgagagttgatgaccatccaa
gctgaaataagtggtctggaaaacgccgacgttgtcatggaggatgcccccggggtggaa
gagaccgaggagcaggaagaagaggagttttactcgaggggaggggaggcccttctcgag
gcaagaagacgcatcgccgaatattcgctgccgcgggcaaaacgacgggtcgctttccaa
aagcaagaagctacgatccctttacgaacccacgtcaagttcagaaaacacgtcaaggag
cgactgcaggctttcgagcttcaaggcagccagactgtcggcgaaagacacatcagtatg
acgaggatatcgcccaacggagagctggtggctgtcggaaactggggagggcaggtcaag
ctggtggagataccgagcctgaccgagaagatgagctttcggggccacaccaacaagatt
agcgggttatcctggtttccaggggccacgctgcccgagaagaacatctcctcggactcg
gtcaattttgcatctggcggagcggaaggtctgatacacttgtggtcactgagccaggac
actcccgtatccaaactgcagggacactcccagcgcgtctgccgcgtcgagtttcatcca
tccgggcgctatcttgcttccgcatcggaggacacgtcatggaggctctgggacgtcgaa
accacagccgagacactcctccaggaagggcactcgcggggggtttacgcaatcagcttc
aacacggacggctcgctcctggctagtgccggcctggacagcattggtcgaatctgggac
ttgcgatctgggagaactgtcatgattctggacggccacctggacggtcacatcaaaccc
atacacgcgctggactggagctcggacggacatcgcgtcctgtcggggtcggctgacgga
tggatcaagtgctgggatgtccgcaaggttcagcggaccggaggcatcggcgctcacagc
agcgcagtgtcggatatgcggtggttcaagggctgcgacgaccccctggcaggcacacct
cccggcgtcgacgacaagggcgcccagatcccaaagaagtccagcacgtttttcatctcg
agcgggttcgacaagaatgtcaagatcttttcggcggatgactggacgcttgtgcagaca
ttgagcggccacacagggcccgtcgcgagtgtagattacagcagggacggcaaatggatc
gtcagcggtggacatgaccggacagtcaagctatggggccgaaatgacggtgaatctctg
tga
DBGET
integrated database retrieval system