KEGG   Ustilaginoidea virens: 66062733
Entry
66062733          CDS       T11247                                 
Symbol
UV8b_01955
Name
(RefSeq) uncharacterized protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
uvi  Ustilaginoidea virens
Pathway
uvi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:uvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    66062733 (UV8b_01955)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:uvi03041]
    66062733 (UV8b_01955)
Spliceosome [BR:uvi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    66062733 (UV8b_01955)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_THOC3 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WDR55 EIF3I WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st PRP4 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_EML WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_RIG_1st Beta-prop_SCAP WDR54 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_Vps41 Beta-prop_RIG_2nd Tricorn_2nd Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_VPS8 Nbas_N Beta-prop_WDR11_2nd
Other DBs
NCBI-GeneID: 66062733
NCBI-ProteinID: XP_042995387
UniProt: A0A063C2U7
LinkDB
Position
2:681839..683401
AA seq 520 aa
MMHPSRQAYVEDADSPVGIALEDLKDDQDYDMPTAPGAPPEKTSAILSQFSRKRLAATIA
VPTDDGRVRARLREMGEPVTLFGEGPGDRRDRLRELMTIQAEISGLENADVVMEDAPGVE
ETEEQEEEEFYSRGGEALLEARRRIAEYSLPRAKRRVAFQKQEATIPLRTHVKFRKHVKE
RLQAFELQGSQTVGERHISMTRISPNGELVAVGNWGGQVKLVEIPSLTEKMSFRGHTNKI
SGLSWFPGATLPEKNISSDSVNFASGGAEGLIHLWSLSQDTPVSKLQGHSQRVCRVEFHP
SGRYLASASEDTSWRLWDVETTAETLLQEGHSRGVYAISFNTDGSLLASAGLDSIGRIWD
LRSGRTVMILDGHLDGHIKPIHALDWSSDGHRVLSGSADGWIKCWDVRKVQRTGGIGAHS
SAVSDMRWFKGCDDPLAGTPPGVDDKGAQIPKKSSTFFISSGFDKNVKIFSADDWTLVQT
LSGHTGPVASVDYSRDGKWIVSGGHDRTVKLWGRNDGESL
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgatgcatccatcgcgccaggcatatgtggaggacgccgactcaccagtcggcattgcc
ctcgaggacctcaaagatgatcaagactacgatatgccgacggcacccggtgcaccgccc
gagaagacttccgcaatactgagccagttcagcaggaagcgcctcgcggctacaattgcc
gtgcccaccgacgacgggcgcgtgcgcgcaaggctcagggaaatgggagagcccgtcacc
ctgttcggggagggtcctggggatcgtcgtgaccgtctgcgagagttgatgaccatccaa
gctgaaataagtggtctggaaaacgccgacgttgtcatggaggatgcccccggggtggaa
gagaccgaggagcaggaagaagaggagttttactcgaggggaggggaggcccttctcgag
gcaagaagacgcatcgccgaatattcgctgccgcgggcaaaacgacgggtcgctttccaa
aagcaagaagctacgatccctttacgaacccacgtcaagttcagaaaacacgtcaaggag
cgactgcaggctttcgagcttcaaggcagccagactgtcggcgaaagacacatcagtatg
acgaggatatcgcccaacggagagctggtggctgtcggaaactggggagggcaggtcaag
ctggtggagataccgagcctgaccgagaagatgagctttcggggccacaccaacaagatt
agcgggttatcctggtttccaggggccacgctgcccgagaagaacatctcctcggactcg
gtcaattttgcatctggcggagcggaaggtctgatacacttgtggtcactgagccaggac
actcccgtatccaaactgcagggacactcccagcgcgtctgccgcgtcgagtttcatcca
tccgggcgctatcttgcttccgcatcggaggacacgtcatggaggctctgggacgtcgaa
accacagccgagacactcctccaggaagggcactcgcggggggtttacgcaatcagcttc
aacacggacggctcgctcctggctagtgccggcctggacagcattggtcgaatctgggac
ttgcgatctgggagaactgtcatgattctggacggccacctggacggtcacatcaaaccc
atacacgcgctggactggagctcggacggacatcgcgtcctgtcggggtcggctgacgga
tggatcaagtgctgggatgtccgcaaggttcagcggaccggaggcatcggcgctcacagc
agcgcagtgtcggatatgcggtggttcaagggctgcgacgaccccctggcaggcacacct
cccggcgtcgacgacaagggcgcccagatcccaaagaagtccagcacgtttttcatctcg
agcgggttcgacaagaatgtcaagatcttttcggcggatgactggacgcttgtgcagaca
ttgagcggccacacagggcccgtcgcgagtgtagattacagcagggacggcaaatggatc
gtcagcggtggacatgaccggacagtcaagctatggggccgaaatgacggtgaatctctg
tga

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