KEGG   Ustilaginoidea virens: 66062735
Entry
66062735          CDS       T11247                                 
Symbol
UV8b_01957
Name
(RefSeq) uncharacterized protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
uvi  Ustilaginoidea virens
Pathway
uvi03018  RNA degradation
uvi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:uvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    66062735 (UV8b_01957)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    66062735 (UV8b_01957)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:uvi03019]
    66062735 (UV8b_01957)
   03041 Spliceosome [BR:uvi03041]
    66062735 (UV8b_01957)
Messenger RNA biogenesis [BR:uvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     66062735 (UV8b_01957)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     66062735 (UV8b_01957)
Spliceosome [BR:uvi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    66062735 (UV8b_01957)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 66062735
NCBI-ProteinID: XP_042995389
LinkDB
Position
2:join(687202..687229,687347..687423,687524..687718)
AA seq 99 aa
MATLGGYLNKKVLVVTADSRILVGTLAACDQSTNLVLTDTQERVIHEPDDDEPSEIHPLG
LYLIRGDNVCSVGLVDEALDESINWAEVKGSEIGGIKHV
NT seq 300 nt   +upstreamnt  +downstreamnt
atggcgactctcggagggtacctcaacaaaaaggtcctcgtcgtgactgccgactcgcga
atcttggtcggcaccctggcggcctgcgaccagtcgacaaacttggtcttgacggacacg
caagagcgagttatccacgagcctgacgatgacgagccttcggaaatccacccgcttggc
ctgtatctgatacggggggacaacgtgtgctcggtgggcttggtggacgaggcactggac
gaaagtatcaattgggcggaagtgaaggggtcggaaatcggcggcatcaagcatgtctaa

DBGET integrated database retrieval system