KEGG   Ustilaginoidea virens: 66062818
Entry
66062818          CDS       T11247                                 
Symbol
UV8b_02040
Name
(RefSeq) uncharacterized protein
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
uvi  Ustilaginoidea virens
Pathway
uvi03018  RNA degradation
uvi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:uvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    66062818 (UV8b_02040)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    66062818 (UV8b_02040)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:uvi03019]
    66062818 (UV8b_02040)
   03041 Spliceosome [BR:uvi03041]
    66062818 (UV8b_02040)
Messenger RNA biogenesis [BR:uvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     66062818 (UV8b_02040)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     66062818 (UV8b_02040)
Spliceosome [BR:uvi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    66062818 (UV8b_02040)
 Complex C
  U2 snRNP components
    66062818 (UV8b_02040)
SSDB
Motif
Pfam: LSM Hfq AEP1 SM-ATX
Other DBs
NCBI-GeneID: 66062818
NCBI-ProteinID: XP_042995472
UniProt: A0A063C340
LinkDB
Position
2:join(963731..963744,963859..964006,964120..964222,964295..964323)
AA seq 97 aa
MLFFSFFKTLIDQEVTVELKNDIQLKGTLKSVDQYLNIKLDDISVVEELKYPHLSSVKNV
FIRGSVVRYVHLPAASVDTQLLEDATRREAATHQAKK
NT seq 294 nt   +upstreamnt  +downstreamnt
atgctcttcttcagcttcttcaagaccctcatcgaccaagaggtcaccgtggagctcaaa
aacgacatccagctcaaaggaacgctgaaaagcgtggaccagtatctcaacatcaagctg
gacgatatctcggtggtggaggagctcaagtacccccatctgagctctgtcaagaatgtc
ttcatccggggttctgttgtgcgctacgttcatttgcctgctgcttcggtagatacccag
ttgctggaggatgcgacgaggagagaagctgccactcaccaagccaaaaaatag

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