Ustilaginoidea virens: 66063658
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Entry
66063658 CDS
T11247
Symbol
UV8b_02880
Name
(RefSeq) uncharacterized protein
KO
K12830
splicing factor 3B subunit 3
Organism
uvi Ustilaginoidea virens
Pathway
uvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
66063658 (UV8b_02880)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uvi03021
]
66063658 (UV8b_02880)
03041 Spliceosome [BR:
uvi03041
]
66063658 (UV8b_02880)
03036 Chromosome and associated proteins [BR:
uvi03036
]
66063658 (UV8b_02880)
Transcription machinery [BR:
uvi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
66063658 (UV8b_02880)
Spliceosome [BR:
uvi03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
66063658 (UV8b_02880)
Complex B
66063658 (UV8b_02880)
Complex C
U2 SnRNP specific factors
66063658 (UV8b_02880)
Chromosome and associated proteins [BR:
uvi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
66063658 (UV8b_02880)
TFTC complex
66063658 (UV8b_02880)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_EML_2
WD40_CFAP43
Motif
Other DBs
NCBI-GeneID:
66063658
NCBI-ProteinID:
XP_042996312
UniProt:
A0A8E5HNK4
LinkDB
All DBs
Position
2:complement(join(4027902..4027928,4027985..4029272,4029467..4031546,4031694..4031937))
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AA seq
1212 aa
AA seq
DB search
MATTSNMFLYSLTIQQPNNVAQAVLGQFAGTKEQLIITGAGSQLTLLRPDPSLGKVTTVL
SHDVFGVIRSLAAFRLAGSNKDYLILATDSGRITIVEYLPAQNRFSRLHLETFGKSGIRR
VIPGEYLACDPKGRACIIASTEKNKLVYVLNRSTQAELTISSPLEAHKPGVLVIAMTALD
VGYANPVFAALEIDYSEVDQDSTGQALEDTETQLVYYELDLGLNHVVRKWSEPVDPTASI
LFQVPGGNDGPSGVLVCGEESITYRHSNQDAFRVPIPRRKGATEDPSRKRTIISGVMHKL
KGSAGAFFFLLQSEDGDLFKVTIDMVNDDQGNPTGEVQRLKIKYFDTVPVATSLCILKSG
FLYVASQFGNFSFYQFEKLGDDDEELEFSSDDFPVDPHASYDPVYFHPRPAENLALVESI
PSMNPLMDCKVANLTGEDAPQIYTACGSGARSSFRMLRHGLEVNEIVASELPGIPSAVWT
LKLNRGEHYDAYIVLSFTNGTLVLSIGETVEEVSDSGFATSVPTLAAQLLGDDGLIQVHP
KGIRHIRNGKVNEWDAPQHRSIVAASTNAHQVAIALSSGEIVYFEMDSDGSLAEYDEKKE
MFGTVTCLSLGEVPEGRVRSSFLAVGCDDCTVRILSLDPESTLESKSVQALTAAPSSLAI
IAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKQVRLFQVTVQGTT
CVLGLSSRPWLGYADPITKGFVVTPLNYVDLEWGWNFSSEQCEEGIVGIQGQSLRIFSID
RLGDTLTQKSVPLTYTPRTMVKHPEQPVFYTVESDNNTLPPDLRAQLLADPAVVNGDAKS
LPPEDFGYPKGNRRWASCINVVDLVAEEPRVAQTVDLENNESAISAAIVSFASQDNESFL
IVGTGKDIIVNPRSHSEAYMYVFRFQEEGRELEFIHKTKIEEPPLALIPFQGRLLAGVGK
TLRIYDLGMRQMLRKAQADVASQHIVSLNAQGNRIIVSDVQQGVTYVTYKPTTNKLIPFV
DDTVARWTTCTTMVDYESVAGGDKFGNIFIVRCPQKASEEAEEEQSGLHLMNARDYLHGA
SQRLDLMCHFYAQDIPTSITKTSLVVGGQDVLLWSGLMGTIGVFIPLISREDADFFQSLE
QHLRTEDPPLAGRDHLMYRGYYAPVKGIIDGDLCERYTLLANDKKQMIAGELDRSVREIE
RKISDVRTRSAF
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgacgtccaacatgttcttgtattcgctgactatccagcaaccgaacaacgtc
gcccaagccgtgctcggccaattcgcgggtaccaaagaacagctcatcataactggtgca
ggatcacagttgacgctgttacgaccggatccttctttgggaaaggtgacgaccgttctg
tcgcatgatgtctttggggtaatccgatccctagccgcgtttcgtctagcgggtagtaat
aaagattatctgattctggccacggattctggcagaatcacaattgtcgagtacttgcct
gcacaaaatcgattctcccggctgcatctcgaaacgttcggcaagtctggcatacggcgg
gtgataccaggcgaatatcttgcctgtgaccccaaaggtcgagcttgtatcatagcctct
actgagaaaaacaagctcgtatacgttttgaacagaagtacacaggcagagctgaccatt
tcctcacctttggaagcgcacaaacctggtgtgcttgtcattgccatgaccgcgttggat
gttggttatgcaaaccccgtgtttgccgccttggagatcgattactcagaggtagatcaa
gattccactggccaggctctcgaggataccgagacacagttagtttattacgaactcgat
ctcggactgaaccacgttgttcgaaaatggtcagagcccgtggaccccacagcatctatc
ctctttcaggtacctggaggaaacgacggacccagtggagttcttgtctgcggggaagag
agcataacatatcggcattcgaatcaggacgcgtttcgtgtcccgattccgcggagaaag
ggagcaacggaggacccatcaagaaaacgcacaatcatatcgggcgtcatgcacaaactg
aaaggtagcgctggcgccttcttttttcttttgcaatccgaggatggcgatctcttcaaa
gtcacaattgacatggtcaatgatgatcagggcaacccaaccggcgaagtgcagagactc
aagattaagtacttcgatactgtgccagttgccaccagtctttgtatcttgaaaagtggc
tttctttacgttgccagccagtttggtaacttttccttctaccagtttgaaaaactcggc
gacgatgacgaggagctggaattcagtagtgacgacttcccagtggaccctcacgcttca
tacgatccagtttacttccatcctcgacctgccgagaacttggctctggtcgaaagtatt
ccctctatgaatccgttgatggattgcaaggtggccaacttgaccggagaggatgcgcct
caaatctatactgcgtgcggaagcggagcaagaagctcctttaggatgctaaggcacggc
ttggaagttaacgagattgtggcctcagagttgccaggcattccatcggctgtgtggacg
ttgaagctgaatcggggagaacattacgatgcctacatcgttctgtcattcacaaacggg
acgcttgtgttgagcattggcgaaactgttgaagaagtcagcgactctggctttgctacc
agcgttcccactctcgcagcgcaattgttgggagatgacggtctaattcaggttcacccg
aaaggcattcgacacatccgcaacggaaaggtcaatgaatgggatgctccacagcatcgg
tccattgtggcagcctctacaaatgcccatcaagttgcaattgcactcagctccggcgag
attgtatactttgagatggattcggatggttccctcgcggaatacgatgagaagaaggaa
atgttcgggaccgttacgtgccttagcctgggtgaggtcccagaaggcagagttcgcagt
tcctttctcgctgtaggctgtgacgattgtaccgtccgcatccttagccttgatcctgag
tcaaccttggagagcaagtctgtccaagctctcacggctgcgccatcgtcgctagccatc
attgccatggacgactcatcgtccggtggttccactctttatcttcacatagggttgcac
tctggtgtgtatctgcgcacagtacttgacgaagtcactggcgaattgacagatacgagg
caaaagttcttggggccgaaacaggttcggctattccaggtcaccgtccagggaaccact
tgcgttttagggctgagttctcgaccgtggcttggatatgccgaccccatcaccaaaggc
ttcgtagtcacaccgctcaattacgtggacttggaatggggttggaactttagcagcgag
caatgcgaagaaggtattgtcggaattcaaggccaatctttgaggattttctccattgac
cgcttgggcgacaccttgacacaaaagtctgtccctttgacgtacaccccaaggacaatg
gtcaagcacccggaacaacctgtattttacactgttgaaagtgataataacaccctgcct
ccggacctgcgggcgcagctgctggcggacccggcggtagtcaacggcgacgcgaaatcc
ttaccccccgaagactttggatatccgaaaggcaaccgccgatgggcttcgtgcatcaat
gtggttgacctggtagcagaagaaccccgagttgctcaaacggttgacttggaaaataat
gagtcagctattagtgctgccatcgtctcgtttgccagccaggacaatgaaagcttcctc
attgttggtacagggaaagacatcatcgtcaacccgcgaagccattcagaagcttacatg
tacgttttccgatttcaagaggaagggcgggagctcgagttcattcacaagaccaaaatt
gaagagcctcctttggctttgatacccttccaaggaagacttttagcgggggtggggaaa
acgttgcgcatctacgacctcggcatgcgccagatgctacgaaaggcccaagcagacgta
gcttctcagcatatcgtgtcccttaatgctcaaggcaaccgcatcatagtcagtgatgta
cagcaaggggtaacctatgtcacatacaagcccacgaccaacaaattgataccctttgtt
gacgacacggtagctcgatggacgacttgtacgacaatggtggactatgagtctgtagcg
ggcggagacaagtttggcaacatcttcattgtccgatgtcctcaaaaggcaagcgaggag
gctgaggaggaacaatccggccttcatttgatgaatgcaagggactatctccatggagcc
tcgcaacggttggacctcatgtgccatttctacgcacaagacatccccactagcattacg
aaaaccagcttggtggtcggcggacaggacgtgcttttgtggagcgggttaatgggaacg
atcggagtgtttattcctctcatcagtcgagaggacgcggattttttccagagcctcgaa
caacatctccgaactgaagatccacccttggcaggcagagatcatctgatgtatcgaggg
tattatgcgccagtcaagggaattatcgatggtgacctttgcgaacgatacacgctgctc
gccaatgataagaagcaaatgattgccggcgagctggatcgatcggttcgagagattgag
aggaagatatcggatgttcgtacccgatccgctttttaa
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integrated database retrieval system
