Ustilaginoidea virens: 66064285
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Entry
66064285 CDS
T11247
Symbol
UV8b_03507
Name
(RefSeq) uncharacterized protein
KO
K26109
nuclear exosome regulator NRDE2
Organism
uvi Ustilaginoidea virens
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uvi03019
]
66064285 (UV8b_03507)
Messenger RNA biogenesis [BR:
uvi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
66064285 (UV8b_03507)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
HAT_PRP39_N
Cas9_RuvC
Motif
Other DBs
NCBI-GeneID:
66064285
NCBI-ProteinID:
XP_042996939
UniProt:
A0A8E5MH40
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All DBs
Position
3:join(858546..860789,860854..861305,861369..861869,861961..862162)
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AA seq
1132 aa
AA seq
DB search
MTDPAGENDARLAVPRFSSFRAEKPEVHARPKAKEPRSRHADKDAPTKSPARHARHRDSR
RDHHGLDGSHSRRRHRRRSPSRRKSRDAPQPPEASPEGTSSPVFIVDTEGDRFISRYGGV
DRSQIPSYYRHGSGRVLGTQGRLVLHRDGPRDQFSLRYPGEGPSILGKGGLRSESVYLRG
QPIRVRPRIKRDDLGAEDHDSGYLSVGGSKRRKLGHVDSESSADEGPSYRSIEGRAKAEA
FQDESDEQTSEDGEAVDLSEANPLKWKTIQLNGRVKEHPGDIDAWLELVDHQDLLQRAEA
SLDERAAASVARSFSEIKVSMLESALSNASAAQDRARLLVRLMREGAKVWSSNMAARRWL
ELSAEEAGDFELWRAHVDFEMSSVTTIQFDRVKSMLVERLKGAAHVSGLQPNVDTSEAIY
VFLRAMRFIHDSGYKELAVAAWQALLEINFLRPISSQTEDRDNMASFRDFWESELPRLGD
ADAQGWRRYATTSGPTEAPEPVAQEPLEQISTGDVYKAWGHSERCHSERAGRPARTMDDG
TEDDPFRVVMFSDIEPWLFAIPESEVKGEVGGELIDAFLVFCGLPPAFRASKWTELAVSD
QFTFRSAPVGTGVRNEMPHDADGHVQRATPEFDVGNANVAMSASLLFPGTSWFRYFSSHT
KHLAVDAAQILRTLGQLVHLADVGALSVYYLGFAHGQDASMVKKVAKALLKKYPNAADVY
NAYALAEMAAGNREIAVKVISSAADSSWLSAGALGFQLFKSSSWMELQTGRKNHAVWRLC
SAFDNGGQHAGHDVDTESVSPTVVLKTRQALSSRIQECFYQGKICDAGIYIEGLVLLAYL
TVGGCTEPASEAQGNISAAVDVLGNMSAEFESHGYGHSSSHERVLQFGANVLYLNAQRGP
FRRQFLRDTLSAFLEPFPQNTMFLALAEWADSGLRVVDETRQLLRERILVEGRDSISGRI
FSVTHEMKRGNASSTGAAFEHALSSEVCKFNAGLWASYVDFCTANKQLRGRAKDVFYKAV
RHCPWSKEVLMGAFGALIRDMESDELRSVYNTMTGKGLRVHVDLEDRKADILGAASMPSD
ASLSVHLGGNPGSSLPRIIGFTQLSRSDSFLASSGLVLERCSELDDCAERQW
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccctgcaggtgaaaacgacgccaggctggctgtccccaggttttcatccttc
cgagccgagaagcccgaggtgcacgccagaccaaaggccaaggagcccagatccaggcac
gccgacaaggatgccccaacaaagtcgcccgcccgtcatgctcgccaccgcgactcgcgt
cgtgaccaccatggtcttgatggctctcattcccgtcgacgccatagacgtcggtcgcca
agtcgtcgcaaatcacgcgacgctccgcaaccccccgaggcttcacctgagggaacctca
tcgccagtgtttatcgtagacaccgagggcgatcgcttcatctctcgatatgggggcgtt
gatcgttcccagatcccttcctattacaggcacggtagcggcagggtcctcggcacccag
ggcagattggttcttcatcgagatgggcctagagatcagtttagcctccgatatcctggg
gagggaccaagtatcctcggcaaaggcggtttgcggtcagagtcagtctatcttcgaggt
cagcccatcagggtacgccctaggataaagcgcgatgatctgggtgccgaggaccatgac
agcggatacttgtccgtgggagggtcgaaaagacgtaaacttggccacgtggacagcgag
tcatcggccgatgagggaccgtcctatagatcaatcgaggggagagcaaaagcggaagcg
ttccaggatgaatcggatgagcagacgtcagaggatggagaagccgtggacctgagcgag
gctaaccctctcaaatggaaaaccatccagttaaatgggcgcgtcaaagagcaccctggg
gatatcgatgcgtggttagaactggtcgatcaccaggacctgttgcaacgcgctgaggcc
tctcttgacgagcgagcggctgcaagcgtggcacgcagcttctcggaaatcaaagtctcc
atgctggagtccgcgctcagcaatgcttccgccgctcaagacagagcgaggcttttggtg
cgcctcatgcgtgagggagcaaaagtctggtcaagcaacatggcggccagaagatggtta
gagttgtctgcggaggaagcaggcgactttgagctatggagggcgcacgtcgattttgaa
atgtccagtgtcaccaccattcagtttgaccgcgtgaaatcgatgctggtggagcggctc
aagggcgcagcccatgtctctggtctgcagccgaatgttgacacttctgaagcgatttac
gtcttcctccgggccatgaggtttattcatgactctgggtataaggagcttgctgtagca
gcgtggcaggccttgctggaaatcaactttttgcgacccatctccagccaaactgaggac
agggacaacatggcttcattccgggatttttgggaaagcgagttgccacggctgggcgat
gcagatgcgcagggctggaggcgatatgcgacgacctctgggccgacagaggcccccgag
ccggtggcacaagagccactggaacagatatcaacaggagacgtctacaaggcttggggc
cattctgaacgttgccactccgaacgggccgggcgtccagcaagaaccatggatgacggt
accgaggatgatccgtttcgggtggtcatgttttcagatatcgagccgtggctgtttgct
attcccgagtcggaagtgaaaggtgaggttgggggggaactgatcgatgccttcctggtg
ttctgcggattacctccggcttttcgggccagcaaatggacagagctggcagtcagcgat
cagtttacttttcgatccgcaccagtcggcacaggagttcgcaatgaaatgccacacgat
gccgacggtcacgttcagcgcgcaacacccgagtttgatgttgggaatgccaatgtagcc
atgtcagcgtctcttctctttccgggcacgtcctggtttcggtactttagctcacacacg
aaacatctggctgtggatgcagcacagatactccggacgctggggcaactggtgcacctg
gcagacgtaggggcactttccgtttactacctcggcttcgcccatggccaagatgcatcg
atggtgaagaaggttgcaaaggctcttctgaagaagtaccccaacgcggcggatgtgtac
aatgcgtatgctctggcggagatggctgccggcaaccgcgaaattgccgtcaaggtgatt
tcctctgcagccgactcctcttggctgtctgcgggggctctggggtttcagctcttcaag
tcctcgagctggatggagctccaaacggggaggaagaaccacgccgtttggcgattgtgt
tctgcctttgacaacggtggccagcacgccggccacgatgtggacacggaaagtgtttct
ccgacagtcgtcctgaagacgcggcaagcactctcttcgaggatccaagaatgcttctac
caaggcaagatctgcgacgccggcatctacattgaaggcctggttctgctggcatattta
acggtcgggggttgcacggagccagcatcagaagcacagggtaatatatccgccgcggtg
gatgtccttgggaacatgtcggccgagttcgaatcacacggatacggccacagctcaagt
catgaacgggtgcttcagttcggggcaaacgtcttatacctgaacgcccagcgaggacct
ttccgcagacagttcctgcgcgacacgctgtccgcgttcctggagccgtttccccaaaac
accatgttcctcgcgttggccgagtgggcagactccggtcttcgggtcgtcgacgaaacg
aggcagctgctgcgcgagaggatcctcgtcgaggggcgcgacagcatcagcggccgcata
ttctccgtcacgcatgagatgaagaggggcaacgcgagctctacaggcgcggcgtttgag
cacgccctctcgagcgaggtgtgcaagttcaacgcgggactgtgggcgtcgtacgtggac
ttttgcaccgcgaacaagcagctgcgaggcagggccaaggacgtcttctacaaggccgtc
aggcactgtccgtggtccaaggaggtgctgatgggggcgtttggcgccttgattcgcgac
atggagtcggatgagctgaggtctgtgtacaacacgatgacgggcaagggcttgcgggtg
catgtggacctggaggatcggaaggctgatattcttggcgctgcctcgatgcccagcgat
gcctcgttatcggttcatcttggtggtaatcctggttcatccctcccacgcatcataggc
tttacgcagttatcccgttccgatagctttctcgccagctcgggcttggttctggaacgc
tgttcagagctggatgactgcgcggaacgccagtggtag
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