Ustilaginoidea virens: 66064498
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Entry
66064498 CDS
T11247
Symbol
UV8b_03720
Name
(RefSeq) uncharacterized protein
KO
K10755
replication factor C subunit 2/4
Organism
uvi Ustilaginoidea virens
Pathway
uvi03030
DNA replication
uvi03410
Base excision repair
uvi03420
Nucleotide excision repair
uvi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
66064498 (UV8b_03720)
03410 Base excision repair
66064498 (UV8b_03720)
03420 Nucleotide excision repair
66064498 (UV8b_03720)
03430 Mismatch repair
66064498 (UV8b_03720)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
uvi03032
]
66064498 (UV8b_03720)
03036 Chromosome and associated proteins [BR:
uvi03036
]
66064498 (UV8b_03720)
03400 DNA repair and recombination proteins [BR:
uvi03400
]
66064498 (UV8b_03720)
DNA replication proteins [BR:
uvi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
66064498 (UV8b_03720)
DNA Replication Termination Factors
ELG1-RFC complex
66064498 (UV8b_03720)
Chromosome and associated proteins [BR:
uvi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
66064498 (UV8b_03720)
DNA repair and recombination proteins [BR:
uvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
66064498 (UV8b_03720)
Check point factors
HRAD17(Rad24)-RFC complex
66064498 (UV8b_03720)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_16
nSTAND3
RuvB_N
AAA_22
Viral_helicase1
RCF1-5-like_lid
AAA_3
DNAX_ATPase_lid
Rad17
MeaB
Mg_chelatase
AAA_assoc_2
DNA_pol3_gamma3
NTPase_1
AAA_11
KTI12
AAA_19
Gp44_lid
AAA_24
ATPase_2
AAA_28
AAA_18
Motif
Other DBs
NCBI-GeneID:
66064498
NCBI-ProteinID:
XP_042997152
UniProt:
A0A1B5L716
LinkDB
All DBs
Position
3:complement(join(1556162..1556904,1556962..1557182,1557384..1557490))
Genome browser
AA seq
356 aa
AA seq
DB search
MPAAARIEQKGESSTAASKAALASSSNGTPNSELPWVEKYRPAFLDDVVGNTETIERLKI
IAREGNMPHVIISGMPGIGKTTSVLCLARQLLGESYKEAVLELNASDERGIDVVRNRIKG
FAQKKVTLPPGRHKLVILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQ
SRCAILRYAKLSDAQVVKRLLQIIEAEKVEYSDDGLAALVFSAEGDMRQAINNLQSTFAG
FGFVSGDNVFKVVDSPHPIKVQAMLKACYEGNVDSALDTLRELWSLGYSSHDIISTMFKV
TKTISTLSEHSKLEFIKEIGFTHMKILEGVQTLLQLSGCVVRLCKINMDPKRFQVA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctgctgccagaattgagcaaaaaggcgagtcttcgactgcggcgtccaaggca
gccctggcatcgtcttccaatggcactcctaactctgaactgccttgggtggaaaagtat
cgtcccgccttcttggatgatgtcgtcggcaacaccgagacgatagagcgattaaagata
atagccagggaagggaatatgcctcatgtcattatctcaggaatgcccggtattggaaag
acgacaagcgtgctttgcttggccaggcagctcctcggagagtcgtacaaggaagcggtg
ctcgagctcaacgcaagcgatgagcgaggcatcgatgtcgttcgtaatcgaatcaaaggt
tttgcacagaaaaaggtgaccttgcctcctggccgccacaagctcgtcatactcgacgaa
gccgacagcatgacctctggcgcacagcaggccctccgccgaactatggaaatatactcc
aacacgactcgattcgcattcgcgtgtaaccagtcaaacaaaattattgaaccgctgcag
tcacgttgcgccatccttcgatatgccaagctgtcagatgcccaggttgtgaagcggtta
ctacaaatcattgaggctgaaaaggtcgaatacagcgatgacggccttgccgctctcgtc
ttcagcgccgagggggatatgcgacaggccatcaataacctgcagtctacgtttgccgga
tttggtttcgtctctggcgacaatgtcttcaaagttgtcgattctccccacccgatcaag
gtacaggcgatgctgaaagcttgttatgagggcaacgtcgattcggcattggacactcta
agagagctctggagcctgggatattccagtcatgacatcatcagcaccatgttcaaggtg
accaagaccatttcgacattaagcgaacattcgaagctcgagtttatcaaagagattgga
ttcactcatatgaagattctcgaaggtgttcaaacgttactccaactgagcggctgcgtc
gtgcggctgtgcaagatcaatatggatcccaagcgcttccaggtcgcttga
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