Ustilaginoidea virens: 66064662
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Entry
66064662 CDS
T11247
Symbol
UV8b_03884
Name
(RefSeq) uncharacterized protein
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
uvi Ustilaginoidea virens
Pathway
uvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
66064662 (UV8b_03884)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uvi03019
]
66064662 (UV8b_03884)
Messenger RNA biogenesis [BR:
uvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
66064662 (UV8b_03884)
SSDB
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Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
66064662
NCBI-ProteinID:
XP_042997316
UniProt:
A0A1B5KSJ3
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Position
3:complement(join(3670988..3671244,3671338..3671875))
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AA seq
264 aa
AA seq
DB search
MSTIPPSALQSAQPPLVPLGFNSKQPEKVTLYPLSNYTFGVKETQPEEDPSVIARLKRLE
EHFNEHGMRRTCEGILVCHEHNHPHILMLQIANAFFKLPGDYLRPEDEEEEGFKSRLDER
LAPVGRIGEGEEAGDWEVGECLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIHLPKTK
VLSVPKNMKLLAVPLFELYDNTARYGPQLSAIPHLLSRYNFEFVDEIGNVVAMTPGVAPP
DGYVPKTKVLAGDDTDMKEENGTL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgataccgccgtccgccctgcagtctgcccagccacccctggtccctctgggg
ttcaactcgaagcaacccgaaaaagtcacgctttaccctctctctaactatacgtttggc
gtcaaagagacccagccggaagaggatccctctgtcattgcgcgtttaaaacggcttgag
gaacacttcaacgagcatggcatgcgccgcacgtgcgaaggcattcttgtttgccacgag
cataaccaccctcacattctcatgctgcagatagccaatgcgttcttcaagctccccggc
gactacctcaggcccgaagatgaggaggaggaaggcttcaagtctaggctagacgagaga
ctggccccggtgggtcggataggtgaaggtgaagaagctggtgattgggaagttggggaa
tgccttgcgcaatggtggcgtcccaacttcgagaccttcatgtatccgttcatcccagcc
cacgtcactcggcccaaggaatgcaagaagctgtactttattcacttgccgaaaaccaag
gttttgagcgtccctaaaaacatgaagcttcttgcagtaccgctattcgaactatacgat
aacaccgcccgttatggtccacaactatcggctattccgcaccttctcagtcgttacaac
tttgaatttgtcgacgagattggcaacgtcgtagccatgactcccggagttgctccaccc
gatggctacgtgccgaaaacaaaagtcttggccggcgacgatacggacatgaaggaggag
aatgggacgctgtag
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