Ustilaginoidea virens: 66064932
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Entry
66064932 CDS
T11247
Symbol
UV8b_04154
Name
(RefSeq) uncharacterized protein
KO
K10610
DNA damage-binding protein 1
Organism
uvi Ustilaginoidea virens
Pathway
uvi03420
Nucleotide excision repair
uvi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
66064932 (UV8b_04154)
09124 Replication and repair
03420 Nucleotide excision repair
66064932 (UV8b_04154)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
uvi04121
]
66064932 (UV8b_04154)
03400 DNA repair and recombination proteins [BR:
uvi03400
]
66064932 (UV8b_04154)
Ubiquitin system [BR:
uvi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
66064932 (UV8b_04154)
DNA repair and recombination proteins [BR:
uvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
66064932 (UV8b_04154)
TCR (transcription coupled repair) factors
Cul4-CSA complex
66064932 (UV8b_04154)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
66064932
NCBI-ProteinID:
XP_042997586
UniProt:
A0A8E5HR88
LinkDB
All DBs
Position
3:complement(join(4629174..4629473,4629533..4632629,4632721..4632815))
Genome browser
AA seq
1163 aa
AA seq
DB search
MSFIAPIHRPTSIRHALRIRFLSPDEEDLVVAKANRLEIWRVTDEGMTCLHTKLIYGTIS
MLQRLQPKDSETDLLFIGTDRLQYFNVAWNAETSQLDTVEQTIEDTAEQYMRHSQSQNKC
LVDPTGKFMAMHLWEGVLNVFRLPTRKGVTTKLVALDQVRLTELWMKASTFLHSRTGHPR
IAFLYKTQLDQEEARIAVYRLTKDDKGGDVSRFDPHKERELDQVIPDPYASMLIPVPVKE
EKRYHVRNTEGAKAHLGGLLVVGETLLTYFDSLTYSSVSSTLQDAKIYVAWAEYNGTNYL
LADDYGRLDLLTIQTSLGPTGDVVTGMTVTPMEFADGSAYTSRASSLVYMGDRMLFVASH
HGDSQLLQVDIKTKKMVLIKTLSNNAPILDFAIMDMGNREGDTQSGNAFSSGQARIVAGC
GAYHDGSLRSIRSGVGLEDEGFLDEIQNANQLFALKSFGASHVDTLIVSSTADSRVLKFD
SDGGIEEIYEFQGMTLSTETLLAANTVSGQLLQVTQQSAALLDPDSGVVASSWDVPDGKS
ITAASANSKWALLCVDGTTLVSLNLGDNLAATMSRDTPPDAVADHVDQISCLHAARDFTD
IGIVGWWHSGTISLVTLENLKPLHGESLRHTEDSASIPRDIAVVQLHPPEVSGPTLLVAL
EDGSVVTFNLSPTDYTISNRKSVTLGSSPARLHIIPQSDGTCNVFATTDHASLIYSAEGR
IVYSATAADDATCVTPFDSEAFPGSIVLSTDKDIRLCRVDKERLTHVKSLAVKETVRRVA
YSAGLRAFGLGCIKKELINNEEVITCAFRLVDEIVFRQLGKPFYFDALASLEMVECVIHA
ELPDSAGNLAPRFIVGTSVVTDDDCVEEGDTRGRILVLGVDENRQVYQITSHKLKGACRC
LGSLGEYIVAGLSKTVVIYRYVEETTATSSLQKVAAYRSASFPVDLDVCGNMIGVVDLMQ
SLSLVEFIPSQDGSRPRLEERARHYQPGWATSVSHLDEDRWLEADAQGNLMVLKRNRDAP
LEQDRKRLEVTSEMNIGEQINRIRRLHVAVNEKAIVSPKAFLGSIEGTLYLFGDIAPGYQ
DLLLTFQTRLQDYIDAPGHISFDLWRAFRNQSREADAPFRFIDGEMIERFLDLDEAEQKL
VCADLGPTVEDMRDMIEELRRMH
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcattgcaccaatccatagacccacaagcattcggcatgctttgaggataagg
ttcttgtctccagatgaagaggacctggttgtcgcaaaagccaatcgcttggagatctgg
cgcgtcaccgacgagggcatgacctgcctccataccaagctcatttacggtacaatatca
atgcttcaacgcctacaacccaaggactcggaaaccgaccttctgtttatcggcacagac
cgactgcaatactttaatgttgcctggaacgccgaaaccagccagctcgacaccgtcgag
caaaccattgaagatacagccgagcagtacatgcgccattctcaaagtcaaaacaaatgc
ctggttgacccgaccggaaaattcatggctatgcacctctgggaaggtgtcttgaatgtc
tttcggctgcccacgcgcaaaggtgtcacgacgaagcttgtagccctagaccaagtccgc
ctgaccgagctctggatgaaagccagcactttcttgcacagcagaaccggtcacccacgc
atcgcttttctctacaagacacagctggaccaggaagaggcccggatagcagtctacaga
ctcaccaaggacgataaaggtggggatgtctccagattcgaccctcacaaagaaagggag
cttgatcaggtgattccagatccatatgcttccatgctcattcccgttcccgtaaaagag
gagaagcgataccatgttcgcaacaccgaaggagcaaaagcacacctaggcggactactc
gtggtcggagagactcttttgacatatttcgatagtctcacctactccagtgtttcgtca
actttgcaagatgccaaaatctacgttgcctgggcagaatacaacgggaccaattacctg
cttgccgacgactacggcaggctcgatcttctgaccattcaaacgtctttgggaccaaca
ggagatgtagtcaccggcatgaccgtaacgccaatggaattcgccgacgggagtgcatat
acatctcgtgcctcttctctggtgtacatgggtgaccgcatgctgtttgtggcgtcccac
catggcgattcgcaattactgcaagtcgacatcaagacgaagaagatggtgctgatcaaa
acactatccaacaacgcaccaatcttggactttgccatcatggatatgggaaacagggaa
ggcgacactcagtccggaaatgccttctcgtcgggccaggcaaggatcgttgccggctgc
ggagcttatcacgacggcagcttgcggagcattcgcagtggcgttggactagaagatgag
ggcttcctcgatgagatacaaaacgcgaaccaactctttgccttgaaatcctttggagcg
agtcacgtggacacactgatcgtatcgtcaacggcagacagtcgggtcctcaaattcgat
tccgacggaggcatagaagaaatctacgagttccaaggtatgacattgagcacggagacg
ttgcttgccgccaatacggtcagcggccaactacttcaagtaacgcagcaatctgccgcg
ctactggacccggatagtggagtggtagcatcgtcttgggacgtccctgatggaaaatcc
atcactgctgcgtcagctaattccaaatgggctttattatgcgtcgatggaacaacactt
gtatcattgaacttgggggataatttggctgccaccatgtctcgagacactccgcctgat
gctgtcgcagatcatgttgaccagatctcatgtcttcacgccgcgagagactttaccgat
attgggattgtgggttggtggcattccggcacaatatcccttgtgactctggagaaccta
aaaccattgcacggagaaagtctaaggcatacagaagacagtgcctcgatacctcgagat
attgctgtcgtccagcttcatccgcccgaggtgtctggtcctacgcttcttgttgctctc
gaagacggtagcgtcgtgaccttcaacctctcacccacagactacacgatatcgaaccgt
aagagtgtcaccctcggaagtagccctgcacgattacacattattcctcagtcggacgga
acttgcaacgtattcgccactacagaccacgccagcctgatttacagcgctgaaggcagg
atcgtatattccgccaccgcagcagacgacgcaacatgcgtcaccccctttgactcggag
gcattcccgggctctattgtcctgtctaccgataaagacatacgactgtgccgagttgac
aaggagcgcctcactcatgtcaaatcgttagcagtcaaagaaacagttcgacgggttgct
tattctgctggcctgagagcgttcggcttaggctgcatcaaaaaggagctcatcaacaac
gaggaggtgatcacttgcgcgtttagacttgttgatgagattgtttttcgccagcttggg
aagccgttctatttcgacgctctggcttcgttagaaatggtcgaatgcgttattcatgcg
gagctgccggatagcgccggcaatcttgcgccgcgcttcatcgttggaacaagcgttgtc
actgacgatgactgcgttgaagagggagatacacgaggtcgaattctagtccttggcgtc
gatgagaaccgccaggtctatcagattacctcgcacaaactgaaaggagcgtgtcgctgc
ctcggcagtcttggcgagtacattgtggccggcctgtcaaaaaccgtggtgatttacaga
tatgtggaagaaacaaccgcgacatcatctttgcagaaagtagctgcttatcgttcagca
tcattcccggtggatttagacgtgtgtggtaatatgattggagtggttgatctcatgcag
tcgctttccttggttgagtttattccgtcacaggacggatctcggcccaggctggaggag
agggcgcggcattatcaacctggatgggcaacttcagtcagtcacttggacgaggatcga
tggctggaggctgatgcccagggcaacctcatggtcctaaagcgcaaccgagacgcacct
ttggagcaagaccgtaaaagattggaggtgaccagcgagatgaacattggggagcaaatc
aaccgaatccgaagactacacgtcgccgtcaatgagaaggcaattgtctcgccaaaagca
ttcttgggatcgattgagggcaccttgtatttattcggcgacatcgctcctggataccaa
gatttacttctcacttttcagacgagattgcaggattacatagacgcccccggtcacatc
agtttcgatctttggcgagcattcaggaatcagagccgcgaggcggatgctccctttcgc
ttcatagacggcgaaatgatagaaaggtttttggacctagatgaagccgaacagaagctt
gtctgcgcagatttagggccgactgttgaggatatgagagacatgattgaagaattgagg
aggatgcattaa
DBGET
integrated database retrieval system
