Ustilaginoidea virens: 66064960
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Entry
66064960 CDS
T11247
Symbol
UV8b_04182
Name
(RefSeq) uncharacterized protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
uvi Ustilaginoidea virens
Pathway
uvi03440
Homologous recombination
uvi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
66064960 (UV8b_04182)
03450 Non-homologous end-joining
66064960 (UV8b_04182)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
uvi03032
]
66064960 (UV8b_04182)
03400 DNA repair and recombination proteins [BR:
uvi03400
]
66064960 (UV8b_04182)
DNA replication proteins [BR:
uvi03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
66064960 (UV8b_04182)
DNA repair and recombination proteins [BR:
uvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
66064960 (UV8b_04182)
BRCA1-C complex
66064960 (UV8b_04182)
NHEJ (non-homologous end-joining)
MRX complex
66064960 (UV8b_04182)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
AAA_15
SbcC_Walker_B
COG6_N
AAA_29
FliJ
AAA_13
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
66064960
NCBI-ProteinID:
XP_042997614
UniProt:
A0A8E5MHQ8
LinkDB
All DBs
Position
3:complement(join(4728296..4732012,4732070..4732276))
Genome browser
AA seq
1307 aa
AA seq
DB search
MSRIDKLSISGVRSFSPSVREAIQFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSK
GGAFIHDPKLCGEKEVLAQVKLQFRSINDRQHVATRSLQLTVKKATRSQKTLDCSLVVVN
NGERTTTSTRQAQLDEMIPERLGVSPAILDAVIFCHQDESLWPLSEPAALKKRFDEIFEA
LKYTKAIDNLKVLRKKHVEELGKLQNDEAHNKVNKDRGQRAEKRMVGLQGEIEQARERCE
ALSSQMQDTQDQARQKHEQANSFLQIVQNLQNKREQLEYRRDAVNELKQTFDELPGDDEA
LESALEQYEHSMERYRLEAEQNKSQYNALQQQLSLSRKQLSTKLSEQGKHQSDKEKYERQ
LTARMEMIQEAATASGFRGYDGSLNEVQVKSFNEKVQKLLAEKKRDLERLQKENTVELDK
ATAVITELEGQKAARTQDRVSAKQRIGAIDKRTAHLQNDASLIDVDEGARAILDEQLEEV
GARLDKSQKELEKASWDQQISEENDKLWHFEKENEKLGQELVECTRLASERAQLDLRKKE
VAERKRKLDTLTTMWKPKLSATVGDDWDLGTLDSQFQAAVKQQNKSLQEARRILDQTRNK
QQKVAFRLKNAKDSGELKTLEAEKCKQQVLDALREVREGASIDDYTDEVASVEQQVEDLR
NELSLFDALVDYYSKCKRILESKRKCLLCERHFDDGQNASLERLGNKIEKNLDPKGKVDV
EKDLKDSVATLESLRAVRSSYDTFERLTAELPSIRDEQRATEGEHDGLDRQLEEHEARVF
GEEERLRDLDDLSKTVASISQLFRDIKDSEGHVDRIMSQQMSGVVTRSADEIQELQASIG
EKLRGLKARLAKLTADRQRMKDQVTSLELERSELRNKIGHVVGQLDKKLDIQKQIQALRD
EMSHQRESIQRADEELERIEAGIVDARSARDETLRAGRGREQVVADERDSIANSVSEIRM
LDSDIQDYLDRGGPSNLASNQRDIAALERSIGETERDMTDITVRTNKLKQEIDSGDRKKK
NIGDNLNYRKHLRQLEVLRRDIGDLEDRNAREDYERLQGEARSLENQSSRLLAERGSVMG
AMKTKDEELGRLLQEWEMDYKDARHKYRESHIRVETTKAAIEDLAQCGAAVDRAVMQFHS
VKMAEVNRIAGELWQSTYQGTDIDTILIRSDNESSTGKRSYNYRLCMVKQDTEMDMRGRC
SAGQKVLASIIIRLALAESFGVNCGLIALDEPTTNLDRDNIKSLAESLHAIIKARQAQSN
FQLIVITHDEDFLRHMRCSDFCDSFFRVKRDERQNSVIMRESITKIF
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagaatagacaaactatccatttcgggggttcgttcatttagtccctcagtgcgc
gaggccatccaattcaacactccgttgacactcatcgtgggttacaatgggtccggaaag
acgacaatcatcgaatgtctcaagtatgccaccactggggaactgccgccgaatagcaag
ggtggcgcctttattcacgatcccaagctatgtggagaaaaggaggtcctggcgcaagtg
aagctccagttccgctccatcaacgaccgccagcatgttgccacccgcagcttgcagctg
actgtcaagaaagccacgcggtctcagaagacgctcgactgctcgctggtcgttgtgaac
aatggcgagagaaccacgacctcgacgagacaggcgcaactcgacgagatgattcccgaa
cgactcggtgtttcccccgccatcttggatgcagtcatattctgccaccaggacgaatcg
ctgtggccgctcagcgagccggcagctctgaagaagcggtttgacgaaatattcgaggcc
ttgaagtataccaaagccattgataacctcaaggtcctccgcaaaaagcatgttgaagag
ctgggcaagctgcagaacgacgaggcgcacaacaaagtcaacaaagaccgcggccagaga
gctgagaagcgaatggtgggtttgcagggcgaaattgagcaagctcgggaaaggtgtgaa
gccctttcatcccagatgcaggatactcaggatcaagctcgtcaaaaacatgagcaagcg
aacagcttcctccaaatcgtccagaaccttcagaataagcgagaacagctagaataccgt
cgggatgctgtgaacgagttgaaacaaactttcgatgagcttccgggggacgacgaggcg
ctggaaagtgccttggagcagtacgagcacagcatggagcgttaccgcctggaagccgag
cagaacaagagccagtacaacgccttgcaacagcaactgtccctctcacgcaaacaatta
tccaccaagctgtcggagcagggcaagcatcagtctgacaaggaaaaatacgaacgtcaa
ctcacggcgcgtatggaaatgatacaggaagccgcgaccgcctctggcttccgcggttac
gacggcagtctaaatgaggtgcaagtcaagtcgttcaatgaaaaggttcaaaagcttctc
gccgagaagaagcgggatcttgagcgcttgcagaaagaaaacaccgtcgagctggacaag
gcaaccgctgtcataaccgagctggaggggcaaaaggctgcgcgaacgcaagaccgcgtg
tcagccaaacagcgcatcggagccattgacaagcgcacggctcacctccagaacgatgcg
agcttgatcgatgtcgacgagggcgccagagccattctcgacgagcaacttgaagaggtt
ggtgcgaggcttgacaaatcgcagaaagaactggaaaaggctagttgggaccagcaaata
tccgaggagaatgataagctttggcacttcgagaaagagaacgagaaactgggccaagag
cttgttgaatgtacccgcctagcttccgagagggcgcagctcgacctgaggaagaaggag
gtcgccgaaaggaagaggaagcttgacactctgactaccatgtggaagccaaagctttct
gctaccgtgggcgatgactgggacctcggcacgctagactcccagttccaagcggcggtg
aaacaacaaaacaagtcacttcaagaagctcgccggatcctggatcagaccagaaacaag
caacaaaaagtggcattcaggctcaaaaacgcaaaggactctggggagctcaagactctg
gaggccgaaaagtgcaaacagcaagttctggacgctcttcgggaggttcgagagggcgcg
agcatcgacgactacaccgacgaggttgcttccgtcgaacagcaagttgaagacctgcgc
aatgagctgagtctcttcgacgcactggtcgattattacagcaagtgcaagcggatcctc
gagtccaaaagaaagtgtctgctatgcgaacgccacttcgatgacggccagaacgccagc
ctggaaaggcttggtaacaagattgaaaagaacctcgatccaaagggcaaggtggacgtg
gagaaagacttgaaggactcggtggcgactctggagagtcttcgtgccgttcgatcctct
tacgatacgtttgaaagattgaccgcggaactgccctcgatacgggacgagcaaagggcc
actgaaggtgagcatgacgggctcgatcgccagctggaagagcacgaggcaagggttttt
ggtgaggaggagaggttacgggacctcgacgatctctccaagacagtcgcgagcatttct
cagctgttcagggatataaaagactcggaaggacacgtggatcgcataatgtcacagcag
atgtctggtgttgtcacgcgaagcgccgacgagatccaggagctccaggccagcattggc
gagaagctgagaggtctcaaggcgcggctggccaagctcacggcagacagacagcgcatg
aaggatcaggtgacgagtctggagcttgaaagaagcgagctgaggaacaagattggacac
gttgtcggccagctggacaagaagctggatattcaaaagcagatacaagccttgagggac
gaaatgagccatcaacgggagagcattcagcgagctgacgaggagctcgagaggatcgaa
gcaggcatcgtggacgctcggtcagctcgagacgagacgcttcgcgccggacgcggcagg
gagcaagtggtggcggacgagcgggacagcatcgccaactctgtcagcgaaatcagaatg
ctggacagcgacattcaggattacctggaccggggcgggccatccaacctggcgtcgaac
cagcgcgacattgcggcgttggaaaggtcgattggcgagacggaaagggacatgacggac
attacggtccggacgaacaagctgaagcaggagattgacagcggggatcgcaagaagaag
aacattggcgacaacctcaactaccggaagcacctgaggcagctggaggtgctgcggagg
gacattggcgacctggaggaccgcaacgcccgcgaggactacgagcggctgcagggcgag
gctcggtcgctggagaaccagtcgagccggctgctcgccgagcggggctcggtcatgggc
gcgatgaagaccaaggacgaggagctgggcaggctgctgcaggagtgggagatggactac
aaggacgccaggcacaagtaccgcgagtcgcacatccgcgtcgagacgaccaaggcggcc
atcgaggacctggcgcagtgcggcgcggccgtcgaccgggccgtcatgcagttccactcg
gtgaagatggccgaggtcaaccgcatcgccggcgagctgtggcagtcgacgtaccagggg
accgacatcgacaccatcctgatccgctccgacaacgagtcgtcgacgggcaagcgcagc
tacaactaccgcctgtgcatggtcaagcaggacacggagatggacatgcgcggccgctgc
tcggcgggccagaaggtgctcgccagcatcatcatccgcctggcgctggccgagtcgttt
ggcgtcaactgcggcctgattgcgctcgacgagcccaccaccaacctggaccgcgacaac
atcaagagcctggccgagagcctgcacgccatcatcaaggcgcgccaggcgcagagcaac
tttcagctgattgtgattacgcacgacgaggactttctgcgccacatgcgctgcagcgac
ttttgcgacagcttcttccgggtgaagcgggacgagaggcaaaacagcgtcattatgagg
gagagcatcaccaagattttctga
DBGET
integrated database retrieval system
