Ustilaginoidea virens: 66065670
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Entry
66065670 CDS
T11247
Symbol
UV8b_04892
Name
(RefSeq) uncharacterized protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
uvi Ustilaginoidea virens
Pathway
uvi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
66065670 (UV8b_04892)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uvi03021
]
66065670 (UV8b_04892)
Transcription machinery [BR:
uvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
66065670 (UV8b_04892)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
66065670
NCBI-ProteinID:
XP_042998324
UniProt:
A0A8E5HSB6
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All DBs
Position
4:join(1302438..1303496,1303562..1304030,1304126..1304340)
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AA seq
580 aa
AA seq
DB search
MTTKKSLLDGIRYHMMKFSQPQVSDNSVDPTDQTEFARPVTLHRRDARQPHPGRAVKEEE
PELPPVDEKEVERLAQIKAEREAQRAIDQAKIAPVAKEIQPKRPKKQKEEKTMFNRAPKT
DAAKKESDIRYEEALPWHLEDADGKNVWVGNYVAALSEANVAFMIDKSVFRMVPLEKWYK
FTSKPPFQPFTIDQAEAFMNRKVDVGRWVMKDEEKKMGQNDLEATRKLLYGRGQMIKAES
DTFKAASRSEKLDHDELDVSGDEFQDDDETPYLERMDDDDAKESKERIRREQLGANLFGD
GDERGVDKELQEQLREELERQKYGKSTKKALIKRDREDIYASDDSEDKPWSSSSDEESSD
DEEDDKKDGDAKEAHGDSKDKTKAAVNPKGSSTPQGKQKQSDLAKPTKSLKRAGSPTLSE
SSGNESSRKKMKKTPATTSMNQMGTSSSQSNSAARRSKGSHGPGSDGEATGAEMSDSSFV
PRKPVKLMGGSGRGTPSASRAGSPNPTPSAASPNAQTNAGIESWEILEKIPPDGISLQDL
VKQFHGRVGDRPGQMNKGDWIKLVKQLCDYGSDKRLRRRR
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgacgactaaaaaatccttgctcgacggaattcgatatcatatgatgaagttttctcag
cctcaagtatctgacaactccgtggatcctactgatcaaaccgaattcgctcgaccagtg
acgttgcacagaagagacgctcgacagccccatccaggaagagccgtcaaagaggaagaa
cccgagctaccgccagtcgacgagaaagaggtcgaaagactagcccagatcaaggcggaa
cgagaagctcagcgtgccatagatcaagccaaaatcgcgccggtagccaaggaaattcag
cccaaacgacctaaaaaacaaaaggaagaaaaaaccatgttcaatcgagctcccaagact
gacgctgccaaaaaggagtcagatattcgctacgaggaagccttgccatggcatcttgaa
gatgctgatgggaagaacgtgtgggtgggaaactatgtcgcggcgctttccgaggccaac
gttgcctttatgattgataaatccgtctttcgtatggtgcctttggaaaagtggtacaag
ttcacctccaaaccgccgttccaaccctttaccattgatcaggccgaagcgtttatgaac
agaaaggtggatgttgggaggtgggtgatgaaagacgaggaaaagaaaatgggacaaaac
gatctagaagcgacccgaaagctactctatggacgtggtcaaatgatcaaagccgaaagc
gatactttcaaggcagcgtcgcgttcagagaaacttgaccacgacgagctagatgtatcc
ggggacgagtttcaagacgatgatgagacgccctatcttgaacgcatggacgacgacgat
gccaaggagtccaaggagcgcatacgccgcgagcaattgggggcaaacttgtttggagac
ggtgacgagcggggagttgacaaggagcttcaagagcaattgcgagaggaactggaacga
caaaaatatggcaagagtacgaagaaggccctgattaagcgggatcgagaagacatttac
gcaagcgatgattctgaagacaaaccttggagcagttcgtctgacgaagaatcaagtgac
gacgaggaagacgacaagaaagatggagatgccaaagaggctcacggcgattcaaaagac
aagacgaaagcggcagtgaaccccaagggatcgtcgacgccacagggcaagcagaaacaa
agtgacctcgcgaagcccacgaaatccttgaaaagagctgggtcaccaactctgtctgaa
tcgagcggaaatgagtcgagtcgcaaaaagatgaagaaaactcccgcaacaacctccatg
aaccagatgggcacatcttcctcccaatccaacagcgcggctcgccgaagcaagggcagc
cacgggcccggcagcgacggagaagcaacgggtgcagagatgtcggacagttcgtttgtt
ccgaggaagccggtcaagttaatgggcggcagtggccgagggacgccatcagcatcaaga
gctggtagccctaatcccaccccttcagctgcttcccccaacgcccaaaccaacgccgga
attgagtcgtgggaaatcctggaaaagattccgcccgacggcatctccctgcaagatctc
gtgaagcagtttcacggccgggtgggtgatcgtcccggccaaatgaacaagggcgactgg
atcaagttggtgaagcagttgtgcgactatgggtctgataaacggctgcgtcgccgcagg
tag
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