Ustilaginoidea virens: 66065819
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Entry
66065819 CDS
T11247
Symbol
UV8b_05041
Name
(RefSeq) uncharacterized protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
uvi Ustilaginoidea virens
Pathway
uvi03022
Basal transcription factors
uvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
66065819 (UV8b_05041)
09124 Replication and repair
03420 Nucleotide excision repair
66065819 (UV8b_05041)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uvi03021
]
66065819 (UV8b_05041)
03036 Chromosome and associated proteins [BR:
uvi03036
]
66065819 (UV8b_05041)
03400 DNA repair and recombination proteins [BR:
uvi03400
]
66065819 (UV8b_05041)
Enzymes [BR:
uvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
66065819 (UV8b_05041)
Transcription machinery [BR:
uvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
66065819 (UV8b_05041)
Chromosome and associated proteins [BR:
uvi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
66065819 (UV8b_05041)
DNA repair and recombination proteins [BR:
uvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
66065819 (UV8b_05041)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
nSTAND3
SNF2-rel_dom
DUF365
CDHR3_N
HsdM_C
MAL13P1_304_C
GARP
Motif
Other DBs
NCBI-GeneID:
66065819
NCBI-ProteinID:
XP_042998473
UniProt:
A0A1B5KXX8
LinkDB
All DBs
Position
4:join(2250111..2250127,2250184..2250224,2250290..2250299,2250353..2250372,2250443..2250574,2250687..2250940,2251067..2251183,2251230..2251560,2251615..2251712,2251774..2253129)
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AA seq
791 aa
AA seq
DB search
MKFFIDKLPVIFPYPKIYPEQYAYMCDLKKTLDTGGHCVLEMPSGTGKTVSLLSLIVAYQ
QCMPEKRKLIYCSRTMSEIEKALAELKALMKYRTEQLGYEEEFRGLGLTSRKNLCLHPSV
KREKSGTIVDARCRSLTAGFVKEKKQRGENVDLCVYHDNLDLLEPHNLIPNGVWTFEDVL
RYGEDHKQCPYFTARRMMQYCNVVIFSYHYLLDPKIAERVSRDFSKDCIVVFDEAHNIDN
VCIEALSTDITEDSLRRATRGAQNLEQKVTEMRDTDQEQLQNEYQKLVEGLRSADEARQE
DAFMANPALPEDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVRQVISETPPSFLAHL
KEHTFIEKKPLRFCAERLTSLVRTLELTNIEDYQSLQEVATFATLVATYEKGFLLILEPY
ESDTAEVPNPILHFTCLDAAIAIKPVFERFYSVIITSGTISPLEIYPKMLDFSTVIQESY
SMTLARRSFLPMIVTRGSDQASVSTSFQVRNEPSVVRNYGTILVEFAKITPDGLVVFFPS
YLYMESIISMWQGMGILDEVWKYKLILVETPDAQETSLALETYRTACCNGRGAILLCVAR
GKVSEGIDFDHQYGRAVLCIGVPFQYTESRILKARLEFLRETYRIKENDFLSFDAMRHAA
QCLGRVLRGKDDYGIMVLADRRFQKKRSQLPKWINQALLDVDANLSTDMAVSSARRFLRT
MAQPFRAKDQDGISTWGHDDLQRHKEKMDMEKIHEMEEAAKNSTNQDIAALDNYPYVVEE
LDQDMMELDDF
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcttcattgataaattgccagtcatctttccctatccgaaaatttatcctgag
caatatgcatacatgtgtgatctcaaaaagaccctggataccggcggtcattgcgtgctt
gagatgccttcgggtactgggaaaaccgtctctctactttcgcttattgtagcttatcag
caatgtatgcctgaaaagcggaaactgatctactgttctcgtactatgtctgaaatagag
aaagccttggcggaactgaaggctctcatgaaataccgtaccgaacagctcggttatgaa
gaagagtttagaggcttgggattaaccagtcgcaagaacctttgtcttcatccatcagtt
aaacgagaaaagagtggcaccatcgtcgatgcccggtgcagaagcctcacggccggtttt
gttaaagagaaaaaacagcgcggggagaatgtagacctttgtgtttaccatgataatctg
gatttgctggagccccataacctgatacctaacggcgtgtggactttcgaagacgttctt
cgctatggtgaagaccacaaacaatgtccatactttaccgcccgacgcatgatgcaatac
tgtaacgttgtaattttctcttatcactatctcctcgacccgaagattgccgagcgagtc
tcaagagatttttctaaagactgcattgtcgtctttgatgaagcacacaatattgataac
gtgtgcattgaggctttgagtactgatatcacggaggactcacttcgtcgagccactcgc
ggcgcacagaatctggagcaaaaggtcacagaaatgagagatacagaccaagagcaactc
caaaatgaataccagaagctagttgagggccttcgtagtgcggatgaagctcgacaagaa
gatgcatttatggcaaatcctgcgttgcccgaagatctccttaaagaagctgtccccggg
aacattagaagagcagagcattttgttgcgtttctcaaacgattcatcgaatatctcaaa
acgagaatgaaagtccgacaagttatatcggaaaccccgccgtcttttctagcgcatctg
aaagaacatacattcatcgaaaaaaaacctctcaggttttgtgccgaacgattaacttcc
cttgttcggacccttgaacttacaaacattgaggattatcaatcgctacaggaagtggcc
acctttgcaactctagtagcaacctacgaaaaagggtttctcctgatacttgagccatac
gaatcagacaccgccgaggtacccaaccctattctgcatttcacgtgccttgatgccgct
attgcaattaaacctgttttcgaaaggttttactccgtcattatcacgtccggcaccatt
tctcctctggaaatctatccaaaaatgctggatttctccacagtaattcaagagtcctat
agcatgacgcttgcaagacggtcgtttttgccaatgattgtaacacgcggaagtgatcaa
gcctccgtctcaaccagttttcaggtccgaaacgaacccagcgtggtacgaaactacggc
acgatattggtagagtttgctaaaatcacaccggacggactagttgtctttttcccttcc
tatctttacatggagtccattatcagcatgtggcaaggcatgggtattcttgacgaagta
tggaagtacaaactcattctggtcgaaacgccggacgcccaagagacctctttggccctc
gaaacgtatcgcacagcatgctgcaatggaagaggcgccattctgttgtgtgttgcgcga
ggcaaggtctcggaaggtattgatttcgaccatcagtatgggcgcgccgtgttgtgcatt
ggcgtaccatttcaatacacggagtcgcgaatcctgaaggcgcgcctggagtttttgagg
gagacgtatcggatcaaggagaacgattttctatcatttgacgccatgcgacacgctgca
caatgccttgggcgtgtcctacgtggaaaggacgattatggaatcatggtcttggccgac
cgtaggttccagaaaaaaagaagccagctgcccaagtggataaaccaggcgcttcttgac
gtggacgcgaatctcagcactgacatggcagtgagcagtgcaagacgattcctaagaacc
atggcacaaccatttcgcgccaaggatcaagacggcatcagtacatggggccacgacgat
cttcaaagacacaaagaaaaaatggatatggagaagatccacgaaatggaagaagcggcg
aaaaactcgacaaatcaagatattgctgctttggacaactacccttacgtcgttgaagag
ctggatcaagacatgatggagttggatgatttttga
DBGET
integrated database retrieval system
