KEGG   Ustilaginoidea virens: 66066559
Entry
66066559          CDS       T11247                                 
Symbol
UV8b_05782
Name
(RefSeq) uncharacterized protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
uvi  Ustilaginoidea virens
Pathway
uvi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:uvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    66066559 (UV8b_05782)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:uvi03021]
    66066559 (UV8b_05782)
   03019 Messenger RNA biogenesis [BR:uvi03019]
    66066559 (UV8b_05782)
Transcription machinery [BR:uvi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     66066559 (UV8b_05782)
Messenger RNA biogenesis [BR:uvi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     66066559 (UV8b_05782)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_4 zf-CCCH_2 zf-CCCH_9 Atrophin-1
Other DBs
NCBI-GeneID: 66066559
NCBI-ProteinID: XP_042999212
UniProt: A0A8E5HUM2
LinkDB
Position
4:complement(4849230..4850075)
AA seq 281 aa
MATTTAAATAILNHTSRPYNFRFSPFLRATHQVGLPVDRPVCRAYQAGSCPNGTRCTERH
VQDASKSTQQSGGLNSLVCKHWLRGLCKKGEHCEFLHEYNLRKMPECNFFMRNGYCSNGE
DCLYLHVDPSSRLPPCPHYDMGFCPLGPACSKKHVRRKVCVFYLAGFCPDGPECRSAHPK
WRKDLDKPTLKTEEKRDEKPDGYGHADGAGSARADEDAERDRDRDRDRDRDRDRDRDRDR
DRERDRGRDRGDRDDGRFGRHRGGGGGKWRGRGGRFRGRGH
NT seq 846 nt   +upstreamnt  +downstreamnt
atggcgacgaccacggcagcagcaacggccatcctcaaccacacctcccggccctacaac
ttccgcttctcgcccttcctccgcgcgacccaccaggtcggcctgccggtcgaccgcccc
gtatgcagagcctaccaggcgggctcgtgccccaacggcacgcgctgcacggagcgccac
gtccaggacgcctccaagtcgacccagcagtcgggcgggctcaactcgctcgtctgcaag
cactggctgcgcgggctgtgcaagaagggcgagcactgcgagttcctgcacgagtacaac
ctgcgcaagatgcccgagtgcaacttcttcatgcgcaacgggtactgctccaacggggag
gactgcctgtacctgcacgtcgacccgtcgtccaggctgccgccctgcccgcactacgac
atgggcttctgcccgctcgggccggcgtgctccaagaagcacgtgaggaggaaggtgtgc
gtcttctacctggcggggttctgccccgacgggcccgagtgcaggagcgcgcatcccaag
tggaggaaggacttggacaagccgacgttgaagacggaggagaagagggatgagaagccg
gatgggtacggccatgccgacggggcgggctcggcgagggcggacgaagacgcggaacgg
gatagggatagggacagggacagggacagggacagggatagggaccgggaccgggaccgg
gaccgcgagagggatcggggaagggatcggggggatcgggacgacgggaggtttggtcgg
cacagaggaggtggcggtggcaagtggagggggcgtggaggcaggttcagagggcgaggg
cattga

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