Ustilaginoidea virens: 66066559
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Entry
66066559 CDS
T11247
Symbol
UV8b_05782
Name
(RefSeq) uncharacterized protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
uvi Ustilaginoidea virens
Pathway
uvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
66066559 (UV8b_05782)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uvi03021
]
66066559 (UV8b_05782)
03019 Messenger RNA biogenesis [BR:
uvi03019
]
66066559 (UV8b_05782)
Transcription machinery [BR:
uvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
66066559 (UV8b_05782)
Messenger RNA biogenesis [BR:
uvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
66066559 (UV8b_05782)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_4
zf-CCCH_2
zf-CCCH_9
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
66066559
NCBI-ProteinID:
XP_042999212
UniProt:
A0A8E5HUM2
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Position
4:complement(4849230..4850075)
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AA seq
281 aa
AA seq
DB search
MATTTAAATAILNHTSRPYNFRFSPFLRATHQVGLPVDRPVCRAYQAGSCPNGTRCTERH
VQDASKSTQQSGGLNSLVCKHWLRGLCKKGEHCEFLHEYNLRKMPECNFFMRNGYCSNGE
DCLYLHVDPSSRLPPCPHYDMGFCPLGPACSKKHVRRKVCVFYLAGFCPDGPECRSAHPK
WRKDLDKPTLKTEEKRDEKPDGYGHADGAGSARADEDAERDRDRDRDRDRDRDRDRDRDR
DRERDRGRDRGDRDDGRFGRHRGGGGGKWRGRGGRFRGRGH
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaccacggcagcagcaacggccatcctcaaccacacctcccggccctacaac
ttccgcttctcgcccttcctccgcgcgacccaccaggtcggcctgccggtcgaccgcccc
gtatgcagagcctaccaggcgggctcgtgccccaacggcacgcgctgcacggagcgccac
gtccaggacgcctccaagtcgacccagcagtcgggcgggctcaactcgctcgtctgcaag
cactggctgcgcgggctgtgcaagaagggcgagcactgcgagttcctgcacgagtacaac
ctgcgcaagatgcccgagtgcaacttcttcatgcgcaacgggtactgctccaacggggag
gactgcctgtacctgcacgtcgacccgtcgtccaggctgccgccctgcccgcactacgac
atgggcttctgcccgctcgggccggcgtgctccaagaagcacgtgaggaggaaggtgtgc
gtcttctacctggcggggttctgccccgacgggcccgagtgcaggagcgcgcatcccaag
tggaggaaggacttggacaagccgacgttgaagacggaggagaagagggatgagaagccg
gatgggtacggccatgccgacggggcgggctcggcgagggcggacgaagacgcggaacgg
gatagggatagggacagggacagggacagggacagggatagggaccgggaccgggaccgg
gaccgcgagagggatcggggaagggatcggggggatcgggacgacgggaggtttggtcgg
cacagaggaggtggcggtggcaagtggagggggcgtggaggcaggttcagagggcgaggg
cattga
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integrated database retrieval system