Ustilaginoidea virens: 66067314
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Entry
66067314 CDS
T11247
Symbol
UV8b_06537
Name
(RefSeq) uncharacterized protein
KO
K14311
nuclear pore complex protein Nup188
Organism
uvi Ustilaginoidea virens
Pathway
uvi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
66067314 (UV8b_06537)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uvi03019
]
66067314 (UV8b_06537)
Messenger RNA biogenesis [BR:
uvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
66067314 (UV8b_06537)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_C
Nup188_N-subdom_III
Nup188_SH3-like
Nup188_N
ExsD_C
Motif
Other DBs
NCBI-GeneID:
66067314
NCBI-ProteinID:
XP_042999969
UniProt:
A0A8E5MJY0
LinkDB
All DBs
Position
5:join(2793488..2793558,2793704..2794625,2794685..2797810,2797906..2799261)
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AA seq
1824 aa
AA seq
DB search
MAPVSDSNYFPSLGDCLSDGRVLLSWKNIATALSDSSGRRQRSAEVVAFLSDEYVHSLLK
DPAIAFAPTNDATEKSFATKTAPINVTSASTEKHNIQLLKEDAQWLSKSAKVNPVAALRI
ALLELQTRPSLHLSSPLSSQDVTNLQEAAGIQNGQRTSFMSDLGPNATLDADEVAAEFDK
DHSRKSRLFDVFLTERRYFFMTIDYLQSIRLYGRLPIVSSGDSELATLYKLKSSSSVKDE
SVSLLAAYLKAVTTNVTSLGAGLKSVTDDTLLLRDEVELDWLRTLLTEVTHSLSVVFQVV
DSLADDFAPSSFLNQWFSLMDLCNFFDDIQPINHVIGELILPIKTLAAGVSLALLKPARS
LTFLAEREEEPTPMDDMYDSYLILSDVLEQIHKSVINAASVDCESATPVIFAWTLLLHRM
NFSYQNRIDKRDNLLQQNARETFESGGVVRPTARRNSAGSIFSIESSKFDGFLENSATAR
DLQVVEQLASGATAHGKVFDIMANMARSLGPSSEGSMTPLLSSRLRNTFLEMLKISYPIV
GYQSEPVSSLLAQLDQGRDYWQLVPGQGLAPSQDVLTSMLQDDYSMDFYFQQALDRFPYE
FLPFISMCRALCTAAADVDRSELILGLLRNTPTVTFAIPDSFQGYDLVQEDENTNAFVLQ
EEIFLISPSSSWGRRYVEDDAYRLPIGSYGRFITDTGRVALMEFPHSSLSLLGRQLEISL
IKEGYRCVLGMLQPEEIAEVISLFATLLRMESLRTGTHPSAALMHAESDILAEASKHISG
GKDVVTVICDTMDYFMQDELATSEEATINVLTSCVKFLSSILPSQPSRVWSYLARSELLN
SDSRAGKLAKITGNLDLVSEKFEFLFSSLSLFSELIDTAMSSAVQRRVGNKPATRQKAEP
NPWLGTADKVLAKVSMSIAHASVDVFESTCTWRFDTEIKRVSLLGNVISVLSRLVEYSYA
MGESPTSDSLLSCLRPAGFYVVECFITPTSGTLRFQPILSSLITTLTMAQSTLYSTRTAI
ARHQASSILQFSTTLLRTAKYLGKSSAAFETCLFKSSTLVARMCAVSDAFRGEAIALLEA
LVVNAASTNSEPPSLLGYLGPHISKSFIQVLASLGKPFNLTREVGTTWEFFSSVLRNRQQ
WMSNCLLTGQTPREAMKQENKKSELTADSLFATALGKLKRLKEMEPQESLAILDFVASAQ
NYWPWTVFTLLRDTSYIDGLRSYARDLKPWQLTVRSDAVRTSIDARIAAYIAEILAMQLY
HSRHQGASDALAKSLVADLDYYLRDGVEVAGFNQSLHNNLARNFANKYAGCSLDNFKRTV
LQHRDLGKNYYYDVERANDMLSFDPGWLGRKGNGFRNEMELANANLSLVDAQIALFHAWE
FLLLELSTSLPGHETVAKQMLQVAQQCLNANQGAPGPESIFVKLVDSRASLALVLVQRLA
KLSTVAVQDINQLLGTLVGTIHSVEEPFGKDSISYYRTLLKALFVTLRAYHSCGNKGVGD
SAVDLGGSTVTVTQTVLNLLDHVVGRGFRSLVSLIHDSDSDISPDDLALLTAILQACLSL
PNLDQSPTQILNIMAAHDVVNAATSLFSWADKLSQQGDPVYGELSLLFLLELSTLPLVAE
QLACDGVLSSLLSANLSKYMLKTTVSPYAETPVAQRCYAIWVKGFLPLMLNLLAALGATL
APEVTYVLNQFSHLLRASVDRFEAPGASRTMSRSAGQHLTLLATSEIHSLALLTRVLSAL
GAKNNRDVPAVEWDANGVLENVEFWLSSKRLLKERLLPLGSRELDWKNTRREAGAAGGSE
NLLEEKIVSQLETVRDVLNEELDG
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgtgtctgatagcaactatttcccgtccctgggagattgtctctcagacggt
cgcgttcttttgtcctggaagaatatcgctaccgcgttatcagatagctcgggcagacga
cagcgaagcgccgaagtggtcgcctttttatccgacgaatatgttcacagcctcttgaaa
gatccggccatcgcctttgcgccaaccaatgatgctaccgagaagagttttgcaaccaaa
accgcacccatcaacgtcacctcggcatcgaccgagaaacataatatacagctcctcaaa
gaagatgcccaatggttgagcaagagcgccaaggtaaacccggttgctgcgctgcgaatc
gctcttctcgaactccaaaccaggccttccttgcatctctccagccccctctcatctcag
gatgtcaccaacctgcaagaggcggctgggatccaaaacggccagaggacttcgttcatg
tcggatctcggtccaaacgcgactcttgatgccgacgaggtagctgccgaatttgacaag
gaccattcaagaaaaagcaggcttttcgacgtttttctgaccgagcggcggtatttcttc
atgacgatagactacttgcagtcaatcagactgtatgggaggttgccgatagtctcctcc
ggcgacagcgaattggccaccttgtataagctcaaaagctcgtctagcgtaaaggacgag
agcgtatcgcttcttgcggcgtacctcaaggcagtcactacgaatgtgacaagtttgggg
gctggcctgaaatctgttaccgatgacacccttttgctgagagacgaagttgaactggat
tggttaagaacgctactgaccgaggtcacgcactcgctatccgttgtgttccaggtagta
gatagccttgccgatgactttgcgccgtcgagctttctcaatcaatggttctcactgatg
gacctgtgcaactttttcgacgacattcagcctatcaaccacgtcattggggaattaatc
ctccctataaagacacttgctgcgggtgtctcccttgcgcttctcaaaccagctcggtcc
ctgacgttcttggccgagcgggaagaggaacctacccccatggatgacatgtatgattcc
tatctgatcctatcggatgttttggagcaaatacataaaagcgtaatcaatgctgcgagc
gtagactgcgaaagcgccacgcctgtcatatttgcctggactctgctcctccaccgcatg
aatttctcctaccagaatcgaatcgacaaaagagacaatctgctgcagcaaaatgcccgg
gagacgttcgagtctggtggtgttgttcgacccactgctcggcgaaactcggccggcagt
attttctcgattgagtcttccaagtttgatggcttcctcgagaattcagcgacggccagg
gatctgcaggttgttgagcagctggcatcaggagctacggcgcatggcaaagtcttcgac
atcatggccaacatggccagaagcctcggcccatcgtctgaaggaagcatgaccccgctg
ctgagttctcggttaagaaacacttttcttgaaatgctcaagatctcataccccatcgtc
ggatatcagtccgagccggtcagctcgctgctcgctcaactcgatcaaggacgggattac
tggcagctggtgcctgggcaaggcctggctccgtctcaagatgtcttgacaagcatgctc
caggatgactattcgatggatttttatttccagcaagctctcgacagatttccttacgag
tttctcccgttcatcagcatgtgcagggctctttgcactgccgctgctgatgtggaccgg
tccgaactaatcctggggttgctgagaaacacgccgactgttacgtttgcaattccagac
tccttccaaggttacgatctagtccaagaggacgaaaacacgaatgcctttgtcctccaa
gaggagattttcctcatatcgccgtcttcttcctggggtagacgatacgttgaagacgac
gcttacaggctgcccatcgggagctacggccgtttcatcaccgacactgggcgagtggct
ctaatggaattcccccattcttcactctctcttcttggtcgtcaactcgaaatcagttta
atcaaggaaggttaccggtgtgtactgggcatgttgcagccggaggagattgccgaagtc
atctcgctctttgccactctccttcgcatggaaagccttcgtacaggaacgcacccaagc
gccgccctcatgcacgcagagagtgacatcttggccgaggccagcaagcacatcagcgga
ggcaaagatgtcgtcaccgtgatttgcgacacaatggactactttatgcaggacgagctg
gcgacaagcgaggaagcgacgatcaacgtgttgactagctgcgtcaagtttctgagttct
attctcccctctcagccaagtcgagtttggtcctacttggcaagaagcgagttgctcaac
tctgactcgagggcgggcaaactggcgaagattaccggcaatctcgacttggtatcggaa
aaattcgagtttctcttctcctcgctgtcgctcttctctgagctgatcgacactgccatg
agctcggccgtccaaagacgagttggaaacaaacctgcgaccaggcaaaaggcggagcca
aatccatggcttggaacggcggacaaggtgctggccaaagtgagcatgtcaatagcacac
gcgtcagtcgatgtgtttgagagcacatgcacatggcgcttcgacacggagatcaagcgc
gtatcgttactaggcaatgtaatatccgtgctgagcagactggttgagtacagctacgcc
atgggcgaatctcctacctccgacagccttctttcttgcctgcgacccgcgggcttttac
gtcgtcgaatgcttcataaccccgacaagcggaacactccgatttcagcctattctttct
tctctaatcaccacactcaccatggcccagtcaaccttgtattctactcgcaccgccatt
gcgaggcaccaggcgagctcgattctgcaattctccaccacccttctcaggactgcaaag
tatcttggcaagtcgtcggccgcgtttgaaacttgtcttttcaaaagctccacccttgtc
gctcgcatgtgcgccgtctccgacgccttcagaggagaagcaattgcattactcgaggcg
ctggttgtcaacgcagcatccacaaactcggagccgccatccctgctgggctatctagga
ccccatatttccaagtccttcattcaagtcttggcttcgctgggaaagcccttcaatctg
acgcgggaggtcggcacaacgtgggagtttttctcgtcggtgctccgcaacagacaacag
tggatgtcaaactgccttctcacggggcagactcctcgggaggctatgaagcaggaaaat
aagaagagcgaacttacagcagactctctatttgcaacggcccttggcaagttgaagagg
ttgaaggaaatggagccgcaagagtccctcgccattctagactttgtcgcctcggcgcaa
aattactggccttggacagtcttcactctgctcagagacacttcatacattgatggtttg
cgcagctatgcacgcgatctgaaaccatggcagttgactgtcagatcggatgctgttcga
accagcattgacgccaggatagcagcttacattgccgagatcctggctatgcagctgtac
cactcgagacatcaaggggcctcggacgctttagccaagagcctcgttgccgatctggat
tattaccttcgggatggggtggaagtggcaggtttcaaccagtccctgcacaacaacctt
gcccgaaatttcgcaaacaagtatgccggctgctcgctagacaacttcaagcgaacagtg
ttgcagcatcgggatctcggcaagaactactactacgacgtcgaacgggctaacgacatg
ctgagcttcgatcccggctggctcggacggaaaggaaacgggttccgaaatgaaatggag
ctggcgaacgcgaacctgtcgctggttgatgctcaaatagcccttttccatgcttgggaa
tttctcctgttagagttgagcaccagcctaccgggtcacgagacggtggcgaagcaaatg
ctacaggtcgcgcagcaatgcttgaatgctaaccaaggcgctcctggaccggagagcata
ttcgtcaagcttgtcgattcccgagcaagtttggcgctggtgctggtccagcggcttgcc
aagctgtccactgtcgccgtccaggacattaaccaactactgggcaccttggtcgggacc
atacacagcgtcgaagagccattcgggaaggactccatctcctattatcgcaccctgctc
aaagcgcttttcgtgacgctgagggcctaccattcttgcggcaacaagggcgtcggcgat
tccgcggtggatctgggaggctcgacggtaaccgtcacgcaaacagtgctcaacctcttg
gaccacgtcgtgggacgaggattccgctccctcgtgagcctcatccacgacagcgactcg
gacatctcccccgacgacttggcgttgttgacggcgattctgcaggcttgcttgagtcta
cccaacttggaccagtcgccgacacagatcctgaacatcatggccgcgcatgacgttgtc
aacgcagccacgtctctgttctcgtgggcggacaagctgtcgcagcagggcgaccctgtg
tacggcgaactcagcctcttgttcttgctggagctgtccaccttgcccctcgtcgccgag
cagctggcctgcgacggcgtgctcagcagcttgctgtccgccaacctgtccaagtacatg
ctcaaaaccaccgtctccccgtacgcggagacgcccgtcgcgcaaaggtgctacgccata
tgggtgaagggcttcctacccctgatgctcaacttgctcgcggcgcttggcgccaccctc
gccccagaggtcacctacgtgctgaaccagttctcccacctgctccgcgccagcgtcgat
cggttcgaggcaccaggcgcctcgcgaaccatgtccaggtccgcgggccagcacctcacg
ctgctcgcaacgtcggagatccactccctggcccttctcaccagggtgctctcggccctc
ggcgccaagaacaaccgcgacgtccccgccgtggagtgggatgccaacggcgtgctggag
aatgtcgagttctggctgtcgagcaagaggctgctcaaagaacgcctcctgccgctgggc
tctcgcgagctggactggaagaacacgcggagggaagccggtgcggcaggcgggagtgag
aacttgctcgaggagaagattgtttcccagctggagactgtgagggacgtgttgaacgag
gaactcgacggctga
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