Ustilaginoidea virens: 66067586
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Entry
66067586 CDS
T11247
Symbol
UV8b_06809
Name
(RefSeq) uncharacterized protein
KO
K18664
antiviral helicase SLH1 [EC:
5.6.2.6
]
Organism
uvi Ustilaginoidea virens
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uvi03019
]
66067586 (UV8b_06809)
Enzymes [BR:
uvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
66067586 (UV8b_06809)
Messenger RNA biogenesis [BR:
uvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
66067586 (UV8b_06809)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
AAA_30
T2SSE
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
66067586
NCBI-ProteinID:
XP_043000241
UniProt:
A0A063C799
LinkDB
All DBs
Position
5:join(4039009..4039920,4039984..4042918,4043012..4045035)
Genome browser
AA seq
1956 aa
AA seq
DB search
MASNELTAAEAEWRLQFSAMQAALANLHLPVPSQTDEVSSDDDDWEGCLSGNDGQEDVWD
FISGRDADDYSCESVEAETAGEDVPPRGDISDWFLDKSAVIAFENGLAPDVFQSQVINLL
ASGRSDDELQAELTDLIGFDHLEFIIDILPRKGRILASLKTDGRGEAASSGRLLSRAERE
AALTQRDFEHKTASLAPASKREPQYPHVYRAYHAGNTLSYSGKKYGLPVGSERRQFEKYE
EYYVPAGRKGVLGPGEKLVKISDLDGLCRNTFKGYKTLNRMQSLVFPVGYKTNENMLICA
PTGAGKTDAAMLTILHTIGQHVLPNPLYNPEATEFAVDMDDFKVVYVAPMKALAAEVTDK
LGRRLAWLGIKCREYTGDMQLTKSEIVQTQIIVTTPEKWDVITRKGTGDTELVQKVRLLI
IDEVHMLHDERGAVLESLVARTERQVESTQSLIRIVGLSATLPNYVDVADFLKVNKYAGL
FYFDASFRPVPLEQHFIGVKGKAGSKQSKDNLDIVAFQKVREMLEQDHQVMVFVHSRRDT
MVTARMLHQKAIEHMCMELFDPTSHPKFEQASRDMNSSRAKDIRDLLSKGIGIHHAGMAR
ADRNLMERLFAEGVLKVLCCTATLAWGVNLPAAAVVIKGTQVYSAQDGKFVDLGILDVLQ
IFGRAGRPQFEDTGIGMICTTQDKLPHYLTAITEQQPIESKFSSKLVDNLNAEIALGTVT
SVQDAVQWIGYSYLFVRMQRSPTAYGIEWAEIRDDPTLVQRRRQLAIQAARTLQQCQMII
FNERTEELRSKDIGRIASQYYILHTSIQVFNTMMQPHATEADILKMISMSGEFDNIQSRD
NEAKELTHFRDNVVPCDVDGGIDTPQSKTNILLQSYISRQQPEDFALSNDMNYVAQQSGR
ICRALFMLALNRKWGHQCLVLLSLSKSIEKRIWPFQHPLHQFDLPKTVLNQLDSKENLTV
ETLKDLEPAEIGGLVHNHSAGKTIAKFLSSFPTVHVEAEIAPLNRDVLRIKLHVIPDFSW
KDQVHGTSESFYVWVENSETSEIYHYEFFILNRRKLHDDHELNFTIPLSDPLPTQIYVRA
VSDRWLGAETVTPVSFQHLIRPDTESVYTDLLNLQPLPISALKNPGLEEIYGQRFQFFNP
MQTQIFHTLYHTPGNVLLGSPTGSGKTVAAELAMWWAFRERPGSKVVYIAPMKALVRERV
KDWGTRLARPLGLKIVELTGDNTPDTRTIKDADIIITTPEKWDGISRSWQTRGYVRQVSL
VIIDEIHLLAGDRGPILEIIVSRMNYISSLTKNKVRLLGMSTACANATDLGSWLGVEEGL
FNFKHSVRPVPLELYIDGFPNIRGFCPLMQSMNRPTFLAIKNHSPNKPVIVFVASRRQTR
LTAKDLINFCGMEDNPRRFLRMDEEDLQLNLARVKDDALKEAINFGIGLHHAGLVESDRQ
LSEELFLNNKIQILVATSTLAWGVNLPAHLVVVKGTQFYDAKAEGYRDMDLTDVLQMLGR
AGRPQFDNSGVARIFTQDAKKDFYKHFLHTGFPVESSLHTVLDNHLCAEVSAGTIVTKQD
ALDYLTWTFFFRRLHKNPSYYGLELSPEEHSTVAAQQLANEYMVDMVNKSLDELAQSRCV
EVLPNGDVDATPLGKIMSYYYLSHKTIRHLVRHARANASFLDVLSWMSRAAEYDELPVRH
NEDRVNDTLSANLAYPGHAFGLPMWDPHVKAFLLLQAHMSRIELPITDYVGDQTSVLDQA
IRIVQASVDVLAELGHLSSCLQMMKLLQCIKCARWPTDAPVSILPGIEPDSTEDETTLAE
VGAAKPSEVASLGKRLGLGSSQLLSRFAHAASLLPDVSVSAEHVTWRSLTVALRRVNALV
DRGARIYAPRFPKPQAEGWFVLVADVQRDEVIAVKRATWTSTGVPSARVVMKLPEPQQGQ
ARKVDVLVVSDGYVGLEYRLLGVDIPAPAATQDDDG
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaacgagctgacggcagcagaggcggaatggagactacagttctcagctatg
caagctgcccttgccaatcttcatcttcctgtcccttcccaaaccgacgaggtcagctcg
gatgatgacgattgggaagggtgtctgtctggaaacgacggccaagaagacgtgtgggac
ttcatatccggccgcgacgccgacgactacagctgcgaatctgtcgaggccgagactgcg
ggggaagacgtgcctcctcgaggcgatatctcggactggtttctcgacaaatccgccgtc
attgcttttgagaacggcctggcacccgacgttttccagagccaggtgataaacctgctg
gcgtctggccggtcagatgacgagctccaggctgaactcacggacctgattggattcgac
catcttgaattcatcattgatatcctgcctcggaaagggcgtatcctcgcgtctctcaaa
accgatggccgtggcgaggctgccagcagtggtcgattgttaagcagggccgaacgagag
gccgcccttacgcaacgggattttgagcacaagacggcatctctagctccggcttccaaa
agggagccacagtacccccatgtctacagagcctatcacgccgggaatactctgagctat
tcaggcaagaaatacgggttgccggtaggaagcgagcgtcgccaattcgagaaatacgaa
gagtactatgttcccgctgggcgaaaaggggtgcttggacctggcgagaagctggtcaag
atctcggaccttgacggactgtgccgaaacaccttcaagggctacaagacactcaatcgc
atgcagagcctcgtcttcccggtcgggtacaagacaaacgaaaacatgctgatctgtgcc
cccactggcgcgggtaaaaccgatgccgccatgctgaccatcttgcacaccattgggcag
cacgtcctcccgaatcccctgtacaatcccgaggcaaccgaattcgcagtagacatggat
gacttcaaggttgtctacgtcgcccccatgaaggcgcttgccgctgaagttaccgacaag
ttggggaggcgtctcgcatggctgggcatcaagtgccgagaatatactggagacatgcaa
ctcacaaagtcggaaatcgtgcaaactcaaatcatcgtcaccacaccggagaagtgggat
gtcatcactcgaaaagggacgggcgatacagagctggttcagaaagtgaggcttctgata
attgacgaagtgcacatgctgcacgatgagcgcggtgccgtcctcgagtctcttgtcgcg
aggaccgaacgtcaggtagagagcacgcagtcgcttatccgcatcgttgggctcagtgcc
acgctgccaaattacgtcgatgttgccgactttttgaaggtcaacaagtatgctgggctc
ttctactttgacgcctcttttcgccctgtgcctcttgagcagcacttcatcggcgtcaag
ggcaaagcaggctccaagcaatccaaggacaacctggacattgtcgcattccaaaaggtt
cgagaaatgctcgaacaggatcatcaagtcatggtattcgtccattcgcggcgagacaca
atggtcacggccaggatgcttcaccaaaaggccattgaacacatgtgcatggaactgttt
gacccgaccagccatccgaaattcgagcaggcctcgagggatatgaattcatctcgtgca
aaagacatacgggacttgctttccaaaggaatcggaatacaccatgctgggatggctaga
gctgacagaaacctcatggagaggcttttcgccgaaggcgtcctaaaggtgctgtgctgc
acagctactctggcttggggcgtgaacctgcccgccgctgcggtagtgatcaagggaact
caggtatacagcgctcaagatggcaagttcgtcgacctcggtatcctggacgtgttgcaa
atattcggtcgtgccggccgcccgcaattcgaagacacgggaatcggcatgatctgtacg
actcaagataagctgccgcattacttgacggccatcaccgagcagcagccaatcgagtcc
aagttctcatcaaaactcgttgataatctcaatgctgagattgcgctggggactgtgaca
tcggttcaagacgccgtccaatggattgggtactcgtacctttttgttcgcatgcagaga
agtccaaccgcgtacggcattgaatgggcggaaatccgggatgaccctactcttgtgcag
aggagacgacagcttgccattcaggctgcaagaactctgcagcaatgccaaatgatcata
ttcaacgagaggaccgaagagctgcgcagcaaggacattggccgaatcgcgagccagtac
tacattcttcacacaagcatccaagtgttcaacacgatgatgcagccgcatgccactgaa
gccgacatcctcaaaatgatcagcatgagtggggagtttgacaacattcagtccagggac
aacgaggccaaggagctgacgcatttcagggacaacgtggttccttgcgatgtcgacggg
ggcatcgacacgccccagtccaagaccaacatccttctgcagtcctacatttcgagacag
cagccggaagatttcgccttgtccaacgacatgaattatgttgcccagcagtccggtcgt
atctgccgagccctgttcatgctcgcactgaacaggaaatggggccatcagtgcctggtt
ttgctgagtctgtccaagtcgattgagaagagaatctggccgtttcagcatccgctgcac
cagttcgacctgcccaagacggtgctcaatcagctcgattccaaggagaacctcaccgtg
gagaccttgaaagacttggaacccgccgaaatcggcggtctggtgcacaaccacagcgcg
ggcaagacgattgccaagtttctgagcagcttcccgacggtacacgtggaggcagagatc
gcgccgttgaaccgcgacgtgctgcgaatcaagctgcacgtgattccggacttttcgtgg
aaagatcaggtccacggaacctcggagtcgttttatgtctgggtcgagaactctgaaact
tccgagatctatcactacgagttcttcatcctgaataggagaaagctccacgacgaccac
gaactaaacttcaccatcccgctatcagacccactgccgacgcaaatctacgtcagggca
gtatccgacaggtggctcggtgccgagacggtcacgccagtctcgtttcagcatctcatc
cgccctgacacggaaagcgtgtacacggaccttctcaacttgcagccgctgcccatctcg
gctctgaaaaatcccggcctggaggaaatctacggtcagcggttccagttcttcaacccg
atgcagactcaaatcttccacacgctgtaccacacgcctggcaacgtcctcctcggatcc
ccgacgggcagtggaaagacggtcgcggccgagttggccatgtggtgggctttccgggag
cgacccgggtccaaggtcgtgtacattgctcccatgaaggctctggtccgggagcgcgtc
aaagactgggggacgagattggcccgccctcttggactcaaaatcgtcgaactgactggc
gataataccccggacacacgaactatcaaggatgccgacataataatcacaactcctgag
aaatgggacggcatctcacgttcttggcagaccagaggctacgtcaggcaggtgagcttg
gtcataattgacgagatacatttgcttgcaggcgatagaggtcccattttggagattatt
gtttctcgaatgaattacatttcgtcattgaccaaaaacaaagtccgcctccttggcatg
tccaccgcgtgcgccaacgccaccgacttggggagctggcttggcgtcgaggaagggctt
ttcaacttcaagcactcggtccgtccggtacccctggagctctacattgacggtttcccg
aatatccgagggttctgccccctgatgcagtccatgaaccggccaaccttcctggccatc
aagaaccacagtcccaacaagccagtcattgtctttgtcgcctctcgtagacagactcgc
ctgacggccaaagacctcatcaatttctgcggcatggaggacaaccctcgccgttttctg
cgcatggacgaggaggacctgcagctcaacctcgcacgggtcaaggacgatgctctgaag
gaggccatcaacttcggcatcgggcttcatcacgccggcctggtggagtctgatcgccag
ctgtccgaggagctgtttctgaacaacaagatccagatcctggtagcgaccagtaccctc
gcgtggggtgtgaatctgcccgcgcacctggttgtcgtcaaggggactcagttctacgac
gccaaggctgaagggtacagggacatggacctcaccgacgtgcttcagatgctgggccgg
gccgggcggccgcagtttgacaattccggggtggcgcgcatcttcacgcaagatgccaag
aaggacttctacaagcacttcctgcataccggattcccggtcgagtcgtctctccacacc
gtgctggacaaccatctttgcgccgaggtgtcggccggaaccattgtcaccaagcaagac
gccctggactacctcacgtggacctttttcttccggagactgcacaagaacccttcgtac
tacggcctagagctgtcgcccgaggagcacagcaccgtggccgcgcagcagctggccaac
gagtacatggtcgacatggtcaacaagtcgctcgacgagctcgcccagtcaaggtgcgtc
gaggtcttgcccaacggagacgtcgacgccacgcccctcggcaagatcatgagctactac
tacctgtcgcacaagacgatccgccacctggtgcgccacgccagggcaaatgcgtccttc
ctcgacgtgctctcctggatgtcccgagccgccgagtacgacgagctgcccgtccgccac
aacgaggaccgcgtcaacgacacgctgtcggcgaacctcgcctatcccggccacgccttc
ggcctgcccatgtgggacccgcacgtcaaggccttcctcctcctgcaggcgcacatgtcg
cgcatcgagctccccatcacggactacgtcggcgaccagacctcggtgctggaccaggcc
atccgcatcgtccaggcgtccgtcgacgtcctcgccgagctggggcacctgtcctcgtgc
ctgcagatgatgaagctcctgcagtgcatcaagtgcgcccgctggccgaccgacgccccc
gtctccatcctgcccggcatcgagcccgactcgaccgaggacgagaccacgctggccgaa
gtcggcgcggccaagccctcggaagtggccagcctcggcaagcgcctcggtctcgggtcg
agccagctgctgtcgcgcttcgcccacgccgcgtcgctgcttcccgacgtgtcggtgtcg
gccgagcacgtcacgtggcgctcccttaccgtcgctctgaggcgcgtcaacgctctcgtg
gaccgcggcgcgcgcatctacgcgcccaggttccccaagccccaagccgaaggctggttc
gtgctagtcgccgacgtgcaacgcgacgaggtcattgccgtcaagagggccacgtggacc
agcaccggcgtgccgtccgccagggttgtcatgaagctgccggagccgcagcaaggtcag
gccaggaaagtggacgtgctggtcgtcagcgacggatacgtaggactggaataccggctc
ctgggcgtggacattccagcgcctgctgcgacgcaagacgacgacggttga
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