Ustilaginoidea virens: 66067745
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Entry
66067745 CDS
T11247
Symbol
UV8b_06968
Name
(RefSeq) uncharacterized protein
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
uvi Ustilaginoidea virens
Pathway
uvi03013
Nucleocytoplasmic transport
uvi03015
mRNA surveillance pathway
uvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
66067745 (UV8b_06968)
09122 Translation
03013 Nucleocytoplasmic transport
66067745 (UV8b_06968)
03015 mRNA surveillance pathway
66067745 (UV8b_06968)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uvi03019
]
66067745 (UV8b_06968)
03041 Spliceosome [BR:
uvi03041
]
66067745 (UV8b_06968)
03009 Ribosome biogenesis [BR:
uvi03009
]
66067745 (UV8b_06968)
03012 Translation factors [BR:
uvi03012
]
66067745 (UV8b_06968)
Enzymes [BR:
uvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
66067745 (UV8b_06968)
Messenger RNA biogenesis [BR:
uvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
66067745 (UV8b_06968)
mRNA cycle factors
Stress granule specific factors
66067745 (UV8b_06968)
Spliceosome [BR:
uvi03041
]
Complex C
Other components
EJC/TREX
66067745 (UV8b_06968)
Ribosome biogenesis [BR:
uvi03009
]
Eukaryotic type
90S particles
Helicases
66067745 (UV8b_06968)
Translation factors [BR:
uvi03012
]
Eukaryotic type
Initiation factors
eIF-4
66067745 (UV8b_06968)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
TniB
COG4_N
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
66067745
NCBI-ProteinID:
XP_043000400
UniProt:
A0A063CB91
LinkDB
All DBs
Position
5:complement(join(4639208..4639266,4639329..4640369,4640434..4640542))
Genome browser
AA seq
402 aa
AA seq
DB search
MAEGAGGIDRKADERMEFSTSKEVTVHPTFESMSLKENLLRGIYAYGYESPSAVQSRAIV
QVCKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALG
DYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEAD
ELLNKGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEG
LKQYFIAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGE
MPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGR
FGRKGVAINFVTTEDVRILRDIELYYSTQIDEMPMNVADLIA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggcgcgggaggcattgaccgcaaagcggatgagaggatggagttttccacc
tcaaaggaggttactgtccatcctacctttgagtccatgtccttgaaagagaatctcctc
cgaggtatctacgcctatggctacgaatccccttctgcagttcaatcccgagccatcgta
caggtctgcaagggacgcgacaccatcgcccaagctcaatcagggactggtaaaaccgca
accttctccatcagtatgcttcaggtcatcgacacggctgtgcgcgagacccaggccttg
gtcctttcacccacgcgtgaattggctacccagattcagtcggtcgtcatggccctcggc
gattacatgaacgttcagtgtcacgcctgcattggcggcaccaacgtgggcgaagacatt
cgaaaattggactatggccaacacattgtgtccgggactcctggtcgcgtcgctgacatg
attcgaaggcgacacctgcgaacaagacatattaaaatgctggtgctggatgaggccgac
gagttgcttaacaagggcttccgggaacagatttacgacgtctaccgatacctacctccc
gccacgcaggtcgtggtagtcagcgccacgcttccatacgatgtgctggacatgacgaca
aagttcatgactgatccggttaggatactcgtcaaacgtgatgagcttacgctcgaaggc
ttgaaacagtactttatcgccgtggaaaaggaagattggaagttcgataccctgtgtgac
ttgtacgacaccctgacaatcacgcaagccgtcattttctgcaacacgcgccgcaaggtc
gactggctcacggacaagatgcgcgaggccaactttaccgtcagcagtatgcacggcgaa
atgcctcagaaggaacgcgacagcatcatgcaggatttccggcaagggaatagccgagtc
ctgatctcgaccgacgtctgggcccgtggtattgacgtgcagcaagtcagtctggtcatc
aattacgacctgccaagcaaccgtgagaactatatccaccgcataggccgaagtggccgt
ttcggccgaaagggtgttgctatcaactttgtcaccactgaggatgtgcgcatcctgcga
gacattgagctatactattcgacgcagattgacgagatgccaatgaatgtggccgacctc
atcgcatag
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