Ustilaginoidea virens: 66068176
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Entry
66068176 CDS
T11247
Symbol
UV8b_07399
Name
(RefSeq) uncharacterized protein
KO
K18716
nucleoporin NUP42
Organism
uvi Ustilaginoidea virens
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uvi03019
]
66068176 (UV8b_07399)
Messenger RNA biogenesis [BR:
uvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
66068176 (UV8b_07399)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
zf-CCCH_2
Torus
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
66068176
NCBI-ProteinID:
XP_043000831
UniProt:
A0A8E5HX39
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Position
6:join(1817463..1817508,1817649..1817747,1817819..1818012,1818089..1819486)
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AA seq
578 aa
AA seq
DB search
MTVCKFFQQGNCRYGSNCRFEHPAVANNRFGALASGDGGGNRGLKDALAKYSITTEGIEK
DLTTDTPQWILSAYAPGRNAPEQLFGGFPREQSFEEMRMHYLTAKASGNEQQALNEAQEL
YHNAQQQMQTAVRNVQDAARFIVEAENKHPNRLDICREGTQGAPFGEFLIGKRPASVAHP
AQQPNPFSTGAGSTASSLGGGTATLQTPSAFGQPAALGQRPNPFGAPAFGQPASAFGQPS
QQASAFGQPSQPAAPAFGQSAQTTSAFGQASTLGAKPSPFGTPSFGQAAWAANPQGSAFG
QVGQLGGAKQNPFASSGSANNAASPFGTVNVKNDNSAPPPANPFASSNTAPSNPTSSPFA
SSALNQNGNASQPNPFDQQQTSNPSPFGQAAQVAKSNPFAAAISSEPLQSSDPFAQNAQK
QSNTPFGANASSNTFGENSSQSQNPFASGGSQTQQAPAAPAAAAASDARNPYPPGCAKHH
PSIESHATKKMDGTLASFKGKAVSYKGNLPGILGFDGTWTRIWFPAGAPGYYKDTELPPE
QYDETSKMQWAAFVQTGTFGDGIMPELPPRREFTQWDF
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgtgcaagttcttccagcaaggcaattgcagatatggtagtaattgtcgattc
gaacatcccgcagtcgcgaacaaccgatttggcgcgctcgcgtcgggggacggcggaggg
aatcgaggactcaaagatgcgctcgcaaaatacagcataacaaccgaggggattgaaaaa
gatctcaccaccgacacaccgcaatggatcctgtctgcctacgcccccgggcgaaacgca
ccagaacagctgtttggggggtttcctcgagaacagagcttcgaagagatgaggatgcat
tacctcacagcaaaggcctccggaaacgaacaacaagctctgaatgaagcgcaggagctc
taccacaacgctcagcagcagatgcagacggcagtgagaaatgttcaagacgcggctcgt
ttcatcgtcgaggccgaaaacaagcacccgaatagactagacatatgccgggaagggaca
cagggcgctccatttggcgaattcctcatcggaaagagacctgcatccgtggctcatcca
gcacagcaaccgaaccctttcagcaccggcgccggcagcacggcatcttcgctgggcggt
ggaactgccaccttgcagactccaagtgcttttggacaaccggctgctttagggcagcgg
ccgaatcctttcggtgcgccggctttcgggcagccggcttcagcatttggtcagccctca
caacaagcgtcggctttcggccaaccctcacagccagcagctccagcctttgggcaaagt
gctcaaacaacgtcggcatttggacaagcctccactctaggagccaaaccgagcccgttt
ggaacaccatcattcggtcaagcggcctgggctgcaaatccacaggggagtgcgtttggt
caagtcggccaactgggaggcgcaaaacaaaatccttttgcttccagcggcagcgccaac
aatgctgcaagtccgttcggaaccgtcaacgtcaaaaacgacaacagtgcgccgccgcct
gctaatccgttcgcaagctcaaacactgcgccgagtaatcctacgtctagtcccttcgca
tccagcgccctgaaccagaacggcaatgcgagccagccgaacccctttgaccaacaacag
acatcgaatccgagtcctttcggccaagctgcccaggttgccaaatcgaatccttttgcc
gccgccatctcgtccgagcctttacaatccagcgacccattcgcgcagaatgcacaaaag
cagagcaacactccgtttggagcaaatgccagttccaacacatttggggaaaactcttct
cagtcacaaaatccgtttgcctcgggcggcagccaaacgcagcaagcgcccgctgctccc
gctgcagctgcagcctctgacgcaagaaatccatatcctccaggatgcgccaagcatcac
ccatcgattgaaagccatgcaaccaagaagatggacgggactcttgcttctttcaagggg
aaagccgtttcatacaagggcaacctgcctggcatcctagggttcgacggcacttggact
cgcatttggtttccagcaggcgccccgggctattacaaagacacagaactacctcccgag
cagtatgatgagacgtccaaaatgcaatgggctgcctttgttcaaacagggacgtttggc
gatggtattatgccagagctaccacctcggcgagaatttacacagtgggacttttga
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