Ustilaginoidea virens: 66068850
Help
Entry
66068850 CDS
T11247
Symbol
UV8b_08073
Name
(RefSeq) uncharacterized protein
KO
K10754
replication factor C subunit 1
Organism
uvi Ustilaginoidea virens
Pathway
uvi03030
DNA replication
uvi03410
Base excision repair
uvi03420
Nucleotide excision repair
uvi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
uvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
66068850 (UV8b_08073)
03410 Base excision repair
66068850 (UV8b_08073)
03420 Nucleotide excision repair
66068850 (UV8b_08073)
03430 Mismatch repair
66068850 (UV8b_08073)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
uvi03032
]
66068850 (UV8b_08073)
03400 DNA repair and recombination proteins [BR:
uvi03400
]
66068850 (UV8b_08073)
DNA replication proteins [BR:
uvi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
66068850 (UV8b_08073)
DNA repair and recombination proteins [BR:
uvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
66068850 (UV8b_08073)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
nSTAND3
AAA_22
AAA_30
AAA_18
AAA_14
AAA_33
AAA_5
AAA_16
RuvB_N
NTPase_1
BRCT_2
AAA_28
Motif
Other DBs
NCBI-GeneID:
66068850
NCBI-ProteinID:
XP_043001505
UniProt:
A0A8E5HYI3
LinkDB
All DBs
Position
7:complement(join(1510355..1510658,1510812..1513430,1513485..1513529,1513593..1513641,1513708..1513816))
Genome browser
AA seq
1041 aa
AA seq
DB search
MPDIRSFFGPKGGAAPARKPAPAPAKNEDLSKGKRTKTRKIVEDSDDDAETVESVKPAAK
ATLRKKTVRTEPKGVVTSADAYFASSKGSKVSQQATPKKAPQVKAQVKEELAVRSSPRNK
RPAVVKAEPAAPNGSPRKRRATTAYKQHQDDEGDAYMDDADEDGDDIFAADVKGQSKRKD
DEYVEEESEEDLPRPKRSNLRGQASAIPDADKGERRAVSRKRKSPMPESEDEEEGIPRKK
ATAAKPRAPRTTKKVDEPEDAAIQDIIDSVTTVRPPTPPPKDPNAKFDWRKAAAGGGNAS
VQPMTEVELPEGQEECLSGLSFVFTGILQTIGRDEAQALVKRYGGKVTGQPSSKTSFVVL
GNDAGPSKLAKIKSHGIKTIDENGLFELIRKLPAYGGSGKGAQKAQEKKRAEEDKVKQQV
AEMEAEEKARKAEATKSAQQAAKARGTPAPAPQAACQPTAQLLTSKYAPTQLNHICGNKA
QVEKIQAWLRNWPKAKKYDFQRRGADGLGGERAIIISGPPGIGKTTAAHLAAKLEGYDVL
ETNASDARSKRLVEEGVSDVMNNTSLLGYFARDGKPVDVAKKKIVLVMDEVDGMSAGDRG
GVGALAKFCKKTEVPLILICNERRLPKMKPFDHVAFDIRFNRPTVDQVRSRIMTICHREG
LKLPPPVVDALIEGSNKDIRQIINMIATAKLDQTSMDFDKGKAMTKAWEKHVVLKPWDIC
QKMLGGGLFAPASKSTLNDKIELYFNDHEFSFLMIQENYLRTKPMLLSGKGFTKREEKLK
ALELFDQAAESISDGDLVDRMIHGPQQHWSLMPTHAVFSTVRPASFVAGQLMGSGFTSWL
GNYSKQNKLGRYVRELHSHMRLKSSGDHNEVRQQYMPVLWKELVDRLQRDGTDAVPRVIE
LMDSYFITREDFDAIQELGVGPMIDEDVRVETKTKAAFTRTYNAMSHPVPFMKASSVVAP
KKPVKEAPDLEEAIEEEEDDGDLAEVPDAEDDEADLKKDKYIKQPKKKAAKKATKTAADD
DGETEKPKGRGKAKTKGKGKK
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacatccggtcattctttggcccgaagggtggtgctgctcctgcacgtaaacct
gcgcctgcgccagccaagaacgaagatttatccaaagggaaacggacaaaaactcgaaaa
attgtcgaagacagtgacgatgacgctgaaactgtagagagtgtcaagcccgcggcaaaa
gcaacccttcgaaaaaagaccgtacgtacagagccgaaaggtgtggtgacctccgcagac
gcatatttcgcctcaagcaagggaagcaaagtttcccagcaggcaacaccaaagaaggca
ccacaggtcaaagctcaagtcaaagaggagctcgccgtcagatctagtcctcgaaataaa
aggccggctgtcgttaaagcggagcccgccgctccgaatggatcacctcgaaaaaggaga
gcgacaaccgcgtacaagcaacaccaagacgatgagggtgatgcctacatggacgatgct
gatgaggatggtgacgacatttttgccgccgatgtcaaggggcaaagcaagcgtaaagat
gatgaatatgttgaagaggaatccgaagaagatttgcccaggccgaagcgatccaacttg
cggggccaagcatccgccatcccagatgccgataaaggggaacgtagggcggtatccagg
aagcgaaagtctcccatgccagaatcagaagatgaagaggagggaattccgcgaaagaag
gcgactgccgcaaagcctcgagcaccgcgtacgacgaaaaaagttgacgagcccgaagat
gcagcgattcaagacattatcgatagtgtgacgactgtcagacccccgacaccacccccg
aaagaccccaacgctaaattcgactggaggaaggctgccgctgggggaggcaatgcttct
gttcaacccatgacggaggtggaattgcccgagggccaggaggagtgtctttcgggtctg
tcgtttgtgtttaccggcatcttgcagactattgggcgtgatgaggcccaggcccttgtc
aagcggtacggaggcaaagtcacaggccagccgagcagcaagacgagttttgtcgttcta
ggaaacgacgcagggccgagcaagctggcaaagatcaagtcacacggtatcaagacgatt
gacgagaatggtttattcgaacttatccgcaagcttcctgcatatggcggctcaggaaaa
ggcgcccagaaagctcaagaaaagaagagggccgaggaggacaaggtgaagcagcaagtt
gccgaaatggaagccgaggagaaggcccgaaaagcagaagccaccaagtcggctcaacaa
gcagcaaaggctcgaggaactcctgctcccgccccccaagccgcttgccagcccactgcg
cagcttctgacgtccaaatacgcgcccacccaactgaaccacatttgcggcaacaaagct
caagtagagaagattcaagcatggctgaggaactggcccaaggccaaaaagtacgacttc
cagagacgcggagctgacggcttgggcggcgagagagccatcatcatctctgggccccct
ggtatcggaaaaaccactgctgcccaccttgccgcaaaactggagggctacgacgtgttg
gagaccaacgccagcgatgccagaagcaaaaggctggtggaggagggcgtgagcgacgtg
atgaacaacacgtccctcttgggctactttgcccgtgatggaaaaccagtggatgttgca
aagaagaagattgttctcgtcatggatgaagtagacggcatgtccgcaggcgaccgcgga
ggtgttggtgctcttgccaagttttgcaagaagaccgaggtgcccctgattctcatatgc
aacgagcgtcgacttccaaagatgaagccgtttgaccatgttgcattcgacatccgattc
aaccgtccaacagtcgaccaggtgcgatcgcgaatcatgacgatatgccaccgggagggc
ttgaagcttccgccgccagtggtggacgccctgatcgagggcagcaataaggacattcgg
caaatcatcaacatgatagccactgccaagcttgatcagacgtcgatggatttcgacaag
ggcaaggccatgaccaaggcatgggagaagcatgttgtgttgaagccatgggacatttgc
cagaagatgcttggcggaggactctttgcaccggcaagcaagtcaaccttgaacgacaag
attgagctgtatttcaacgaccacgaattcagcttcctcatgattcaggagaactatctt
cggacaaagccaatgctgctgagcggcaagggctttacgaagcgcgaggaaaagttgaag
gcgctcgagctctttgaccaagctgcggagagcatcagtgacggcgatttggtcgatcgc
atgattcacgggccccagcagcactggagcctgatgcccacccacgccgtcttcagcacc
gtccgacctgcgagcttcgttgccgggcagcttatgggatcgggcttcacgtcgtggctg
ggcaactacagcaagcagaacaaactcgggcggtatgtgcgagagcttcattcgcacatg
cgactcaagtcttcgggcgaccacaacgaagttcggcagcagtacatgccggtgctctgg
aaggagcttgtggatcgcctgcagagggatggcacagatgccgtgcctcgagtgattgag
ctcatggacagctactttatcacgagagaagactttgatgccattcaggaactcggcgtt
ggtcccatgattgatgaggatgtccgcgtcgagacaaagaccaaggcagcgttcacgagg
acatacaacgccatgagccacccggttccgtttatgaaggcaagcagtgtcgtggccccg
aagaagccggtcaaagaagccccggacttggaggaagccatcgaggaggaggaagacgac
ggcgacttggccgaggtgccagacgcagaagatgacgaggcagacctgaagaaggacaag
tacatcaagcagcccaaaaagaaggctgccaagaaggccaccaagactgcggcagacgat
gacggcgagaccgagaagcccaaggggcgaggaaaggcgaagaccaagggcaaggggaag
aagtga
DBGET
integrated database retrieval system
