Variovorax sp. PAMC 28711: AX767_00945
Help
Entry
AX767_00945 CDS
T04325
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa03030
DNA replication
vaa03430
Mismatch repair
vaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AX767_00945
03430 Mismatch repair
AX767_00945
03440 Homologous recombination
AX767_00945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vaa03032
]
AX767_00945
03400 DNA repair and recombination proteins [BR:
vaa03400
]
AX767_00945
Enzymes [BR:
vaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AX767_00945
DNA replication proteins [BR:
vaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AX767_00945
DNA repair and recombination proteins [BR:
vaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AX767_00945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AMM23092
LinkDB
All DBs
Position
complement(171896..172597)
Genome browser
AA seq
233 aa
AA seq
DB search
MRQIVLDTETTGLSAENGDRVIELGCVELFNRKLTGNDFHVYFNPGRESHEDALKVHGLT
TDFLRDKPKFATLANDVVEYLRGAELIIHNAAFDVGFLNKELELAGLPPLRTFVDEVTDT
LAMAKLVYPGKRNSLDALCDRFGVDRSNRTFHGAKLDAQLLADVYINLTRGQDALLIEVA
SNEPAIGTVVAVDLSRFELPVLAATDHEMVAHEALLAQLDKSSNGRTLFRVGV
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaaattgttctcgacaccgaaaccacgggtctctccgccgaaaacggcgaccgc
gtcatcgagttgggttgcgtcgagctgttcaaccgcaagctcaccggcaacgacttccac
gtctacttcaatcccgggcgcgaaagccatgaagatgcgctgaaggtgcacgggctcacc
accgactttctgcgcgacaagccgaagttcgccacgctcgcgaacgatgtcgtcgagtac
cttcgcggcgccgagctgatcattcacaacgccgccttcgacgtgggttttctcaacaag
gaactggaactggccggtcttccgccattgcgcacgttcgtcgacgaagtgaccgacacg
ctggccatggccaagctggtgtaccccggcaagcgcaactcgctcgatgcgttgtgcgac
cgcttcggcgtggaccggtcgaaccgcacatttcacggcgccaagctcgatgcgcagctg
ctggccgacgtctatatcaacctcacgcgcggccaggacgccttgctgatcgaggtggcg
tccaacgaaccggcgatcggcaccgtcgttgccgtcgacctgagccgcttcgaattgccg
gtgctggcggcgaccgaccatgaaatggtggcgcacgaggcgttgctcgcgcagctcgac
aaatccagcaatggccggacgctttttcgcgtgggtgtctga
DBGET
integrated database retrieval system
