Variovorax sp. PAMC 28711: AX767_02770
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Entry
AX767_02770 CDS
T04325
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
vaa
Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vaa03009
]
AX767_02770
Enzymes [BR:
vaa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
AX767_02770
Ribosome biogenesis [BR:
vaa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AX767_02770
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
AMM23403
UniProt:
A0A126Z8E9
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All DBs
Position
538397..538936
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AA seq
179 aa
AA seq
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MPAARLIRFNKPWGVLSQFTPEGRWQGLKDFIDLPGVYVAGRLDADSEGLLLLTDDGKLQ
AHIADPRFKMEKVYWVQVEGTPDEVALAALCSGVQLNDGLTRPARARRLDPPPDVWARQP
PIRERKNIPTAWIELAIREGRNRQVRRMTAAVGLPTLRLIRAAIGPHTLDGLAPGSWAG
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgcccgcctgatccgcttcaacaagccctggggcgtgctgagccagttcacg
cccgaggggcgctggcagggtctcaaggacttcatcgacctgcccggcgtgtacgtcgcg
ggccggctcgatgccgacagcgaaggcctgctgctgctcaccgacgacggcaagctgcag
gcacacattgccgatccgcgcttcaagatggagaaggtgtattgggtgcaggtcgaaggc
acgcccgacgaggtcgcgctggccgccttgtgcagcggggttcagctcaacgacggcctg
acgcggccggcccgcgcgcgccggctcgatccgccgcccgatgtgtgggcgcgtcagccg
ccgattcgcgaacgcaagaacattccgacggcgtggatcgagctggccatccgcgaaggc
cgcaatcggcaggtgcgccgcatgacggccgcggtgggtttgccgaccttgcgcctgatc
cgtgccgccatcggtccgcacacgctcgacgggctcgcgccgggcagctgggcgggctga
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