Variovorax sp. PAMC 28711: AX767_03320
Help
Entry
AX767_03320 CDS
T04325
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa00540
Lipopolysaccharide biosynthesis
vaa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
AX767_03320
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vaa01005
]
AX767_03320
Enzymes [BR:
vaa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
AX767_03320
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
AX767_03320
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
AX767_03320
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
AX767_03320
Lipopolysaccharide biosynthesis proteins [BR:
vaa01005
]
Lipid A
AX767_03320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_1_2
PRY
Motif
Other DBs
NCBI-ProteinID:
AMM23493
UniProt:
A0A126Z8N8
LinkDB
All DBs
Position
complement(642164..643591)
Genome browser
AA seq
475 aa
AA seq
DB search
MRSLMLRLYGAFTRLSQPLVRRKLKKRAVAEPGYAVAVEERFGMYDPVLTGQDWCWIHAV
SLGEARAAGILLIELRRQHPGVPILLTHGTATGREEGARLLEPGDLQVWMPWDTPKAVAA
FLDRFRPRIGVLMETEVWPEMTAACAERGIPLVLANARLNEKSLASAERLAWLARPAYGA
LTAVWAQTEADAHRLVSLGAKVEGVYGNLKFDAAPDIRQLAAADQLRASLPKPIVVFASS
RDGEEQMLLEVLKRFGAAVPVPPAQAAINSIAKRVHDVQWMIVPRHPQRFDEVAALVASH
GFGVARRSAAADELSDAEIWLGDSLGEMALYYGLAHVALLGGSFEPLGGQNLIEAAACGC
PVVMGPSTFNFAEAAELSLAAGAAQRVADMEQAVKAALAIVNNAAKRDAMVQAALAFSSS
NRGAAQRTAAAVLALVQDVPRPVAGAGASGPAGVPAGASAERTDPVLDDLSAPAD
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtgcggtcgttgatgctgcgcctctacggcgcgttcacgcggttgtcgcagccgctggtg
cggcgaaagctcaagaagcgcgccgtggccgagcccggctacgccgtggcggtggaagag
cgcttcggcatgtacgaccccgtactcaccggccaggactggtgctggatccatgcggtg
tcgctcggcgaggcgcgtgccgccggcatcctgctgatcgagctgcgacgccagcatccg
ggcgtgccgatcctgctcacgcacggcacggcgaccggccgcgaagagggcgcccgactg
ctcgagcccggggacctgcaggtgtggatgccgtgggacacgccgaaagcggtggcggca
tttctcgatcgattccgcccgcgcatcggcgtgctgatggaaaccgaggtgtggcccgaa
atgaccgcggcctgcgccgagcgcggcattccgctggtgctcgccaacgcccgcctgaac
gagaagtcgctggcgtccgccgagcgcctcgcctggctggcgcggccggcctacggcgcg
ctcaccgcggtgtgggcgcagaccgaagccgatgcgcaccggctggtgtcgctcggtgcc
aaggtcgaaggcgtctacggcaatctgaagttcgacgccgcccccgacattcggcaactc
gccgcggccgatcagttgcgcgcttcgctgcccaagccgatcgtggtgttcgccagctcg
cgcgacggcgaggagcaaatgctgctcgaggtactgaagcggttcggtgccgccgtgccc
gttccgccggcgcaggccgcgatcaattccatcgcgaagcgcgtgcacgacgtgcagtgg
atgatcgtcccgcgccatccgcagcgtttcgacgaagtggctgcgctggttgcctcgcat
ggcttcggcgtcgcgcgccggagcgccgctgccgacgagctcagcgatgccgagatctgg
ctcggcgactcgctcggcgaaatggcgctttactacggcctggcccacgtggcgctgctc
ggcggcagtttcgagccactgggcgggcagaacctgatcgaagccgccgcctgcggctgc
ccggtggtgatggggccgtcgaccttcaacttcgccgaggcggccgaactgtcgctggcg
gcgggtgccgcgcagcgcgtggccgacatggagcaggcggtgaaggccgctttggccatc
gtcaacaacgcggccaaacgcgatgcgatggttcaggccgcgctggcgttttcgtcatcg
aaccgcggcgccgcgcagcgcacggcggcggcggtgctggcgctggtgcaggacgtgccg
cggcccgtcgcgggtgcgggcgcctcgggtccggccggcgtgccggcgggtgcgtccgcg
gagcgaaccgacccggtgctcgacgacctcagcgcaccggcggactga
DBGET
integrated database retrieval system
