Variovorax sp. PAMC 28711: AX767_03330
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Entry
AX767_03330 CDS
T04325
Name
(GenBank) adenosine deaminase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AX767_03330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vaa03000
]
AX767_03330
03400 DNA repair and recombination proteins [BR:
vaa03400
]
AX767_03330
Enzymes [BR:
vaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AX767_03330
Transcription factors [BR:
vaa03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AX767_03330
DNA repair and recombination proteins [BR:
vaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AX767_03330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
RecR_HhH
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AMM23494
UniProt:
A0A126ZA68
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All DBs
Position
645099..646622
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AA seq
507 aa
AA seq
DB search
MSTPLTPGLEGDACYLAMKTHDARFDGSFFTAVTSTGIYCRPVCRVKLPRRENCRFFRHA
AQCEAEGFRPCLRCRPELAPRAASWSTEDASRILALQAARLIDQPDAWAHLTEGSGPGAA
QIAARLGVSDRHLRRIFETQFGVSPLQYLQTRRLLAAKQLIADTRLPMTQVAPASGFASV
RRFNAAFVAHYGLNPSALRRAGGTAERREGQPVEVRLGYRPPYDAAAMLGFFGRRALRGI
EAVTGSGGQAGIARTLRVLQGAHTHTGWLQMRFEPSREQLLLSVSDSLAGVLPIVIGRVR
AMLDLDAEPMAINAALHARFPDGDGLRVPGTVDGFELAVRAVLGQQITVAAARTLGARLV
EAFGDAIATPVAGLDRLFPTPAAIAAASGDALGHLGIVRQRQAALQAIAREVAEGRLALH
AGADVPSTLVALQALPGIGEWTAQYIAMRALRWPDAFPAGDVALQKALGVTGARAATEAS
QAWRPWRGYAVLRAWHTLSTPPAAARA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccctctcacgcccggccttgaaggcgatgcctgctacctcgcgatgaagacg
cacgacgcgcgtttcgacggttctttttttaccgccgtgacatcgactggcatctattgc
cgcccggtgtgccgggtgaagctgccgcggcgcgagaactgccggttctttcgccacgcg
gcgcagtgcgaagccgaaggttttcgcccctgcctgcgctgccggcccgaacttgcgccg
cgtgcggcgagctggtcgaccgaagacgcgtcgcgcatcctcgcgctgcaggcggcgcgg
ctgatcgaccagcccgatgcctgggcgcatctcaccgagggcagcggccccggcgccgcg
cagatcgcggcgcgccttggcgtgagcgaccggcatctgcgccgcatcttcgaaacgcag
ttcggcgtctcgccgctgcaatacctgcaaacccgccggctgctcgcggccaagcaactc
atcgccgacacccgcctgccgatgacacaggtggcgccggccagcggcttcgcgagcgtg
cggcgtttcaatgcggcgttcgtcgcgcactacgggctcaacccgagcgcgctgcgacgc
gccggtggcacggcggagcgccgcgagggccagccggtcgaagtgcgcctcggttaccgg
ccaccgtacgacgcggcggcgatgctcggctttttcggacggcgcgcactgcgcggcatc
gaggccgtcaccggcagcggcgggcaggcgggcatcgcgcgcacgctgcgcgtgctgcaa
ggcgcgcacacgcacaccggctggctgcagatgcgcttcgagccgtcgcgcgaacaactg
ctgctgtcggtcagcgattcgctcgccggcgtgttgccgatcgtgatcggccgcgtgcgc
gccatgctcgatctcgatgccgagccgatggcgatcaatgcggcgctgcacgcgcgcttc
ccggacggcgacggcttgcgggtgccgggcacggtcgacggcttcgagctcgcggtgcgc
gccgtgctcggccagcagatcacggtggccgcggcgcgcacgctgggcgcgcggctggtc
gaggccttcggcgacgccatcgccacgccggtggccggactcgaccgcttgttcccgacg
cccgccgcgattgccgcggcaagcggcgacgccctgggccacctcggcatcgtgcgccag
cggcaggccgcgctgcaggccatcgcacgcgaggtggccgaaggccggctcgcattgcac
gccggcgccgacgttccctcgacgctggtcgcgctccaggcgctgcccggcatcggcgaa
tggaccgcgcaatacatcgcgatgcgcgcactgcgctggcccgacgcgttcccggccggc
gacgtggcgctgcaaaaagcactcggcgtgaccggcgcccgcgcggccaccgaggcctcg
caagcctggcgcccgtggcgcggctacgcggtgctgcgcgcatggcacaccctttcaact
ccaccagccgctgcccgcgcctga
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