Variovorax sp. PAMC 28711: AX767_03975
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Entry
AX767_03975 CDS
T04325
Name
(GenBank) two-component system sensor histidine kinase/response regulator
Organism
vaa
Variovorax sp. PAMC 28711
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
CHASE3
HATPase_c
GAF_2
HisKA
GAF
CC149
ATG14
IFT57
vRNAP_dom
GAS
T3SSipB
DUF3450
Motif
Other DBs
NCBI-ProteinID:
AMM23595
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Position
764329..767820
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AA seq
1163 aa
AA seq
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MKSQPAIDPQAFQRVLSRNVKLPLVAGVLGAAVFVGLIFYLLSVIGWVEHTDQVTRNATE
AQRLSVDMESSMRGYLISGDVRFLDPYQSAQSRIDGELGALRALVADNKAQVARVDRIAA
AQTSWDAYAADLIALRRADQDYRQSVNAGRGKALSDAMRSDYATFLNIEQNLRFQRNNDA
NRTSLLVVGAYVLFSLLLTGALGYFGRRQLAQLSGSYEAALAEQTAHSEVLQQQAWLRSA
QNELAGELVGQLSVQELGRKTLAFFGRHIGSNVGALYLREPQGQLRRAAAYGFSAAAEAS
PQIFSGTQGLLGQAATERRTVLVEPVEADYLKVNSGLGETAPRAALLLPVTHEGQVNGVI
ELGLMRAPNERATTLLDTVAGTIGSAVAGSRYREQLQDVLAETQQLNEELQVQQEELRTA
NEELEEQSRVLRQSQATLENQQAELEQTNSQLSERTDALDQRNAALKRVQLDLEDRAEEL
QRASRYKSEFLANMSHELRTPLNSALILSKLLGDNPQGNLTPEQVKFAESIYSSGNDLLV
LINDILDIAKVEAGKLEVQPEVVAVNSVAESLRMTFTPLANDKKLAFELDVAPDAPVSLV
TDRQRVEQILKNLLSNALKFTDRGTVRLHVSARAGGGAQFAVSDSGIGIAVDQQDVIFEA
FRQADGTTSRRYGGTGLGLSISRDLTRLLGGELQVHSVPGQGSTFTLALPADIAQPLTAA
ERSDGAATAPQPRPLRATGMPAAKPAASPLVPAPDIPQFADDRALPPDLSRRVLVIEDEP
QFAHILYDLAHELGYRCLVAHGAADGFALARQYVPDAILLDMRLPDSPGLGVLQHLKDDS
HTRHIPVHVVSAQDQSEAALHMGAIGYALKPASRDQLKDVFAKLEQKLSQKVKQVLVVED
DALQRDSVIHLIADDDVAITAVGTGEEALALLRTRVFDCMITDLKLPDLQGSELLQRMAL
EDIVSFPPVIVYTGRNLTRAEEAELLRYSRSIIIKGARSPERLLDEVTLFLHKVESELSS
ERQTMLKTARGRDRVFEGRRILLVDDDVRNIFALTSALEQRGAVVEVGRNGIEALAKLDE
VPDIDLVLMDVMMPEMDGLEATRRLRQDARFQKLPVIAVTAKAMKDDQEQCLAAGANDYL
AKPVDLDRLFSLLRVWMPKMERL
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccagcccgcgattgatccccaagctttccaacgcgtgctcagccgcaacgtc
aagttgccgctcgtggccggcgtgctcggtgcggccgttttcgtcgggctcatcttctat
ctcttgtcggtgatcggctgggtcgagcacaccgaccaggtcacgcgcaacgcgaccgag
gcccagcgactgagcgtggacatggagtcgagcatgcgcggctacctcatcagcggcgac
gtgcgctttctcgatccgtaccagtcggcgcagtctcgcatcgacggcgagttgggcgcc
ttgcgtgcactggtggccgacaacaaggcccaggtggcgcgcgtcgaccgcattgccgct
gcccaaacgagctgggacgcgtatgcggcagacctgatcgccttgcgccgcgccgaccag
gactatcggcaaagcgtgaacgcgggtcgcggcaaggcgctgagcgacgcgatgcggtcc
gattacgccacctttctcaacatcgagcagaacctgcgctttcagcgcaacaacgacgcg
aaccgcacgagcctgctggtggtgggcgcctatgtgctgttcagcctgttgctgaccggc
gcgctcggctacttcggccgtcgccagctggcccagctgtcgggcagctacgaagctgca
ctcgcggagcagaccgcccattccgaagtgctgcagcagcaagcgtggctgcgcagcgca
caaaacgaactggcgggcgagctcgtggggcagctcagcgtgcaggaactggggcgcaag
acgctggcgttcttcggccgccacatcggcagcaacgttggcgcgctctacctgcgcgaa
ccgcagggccagctgcggcgcgcggctgcctacggcttttcggcggcggcggaggccagt
ccgcagatcttctcgggcacgcagggcttgctcgggcaggccgcgaccgagcgccgcacc
gtgctggtcgagccggtggaggccgactacctcaaggtcaactcgggcctcggcgagacc
gcgccgcgtgcggcgctgctgctgccggtgacgcacgaaggccaggtcaacggcgtgatc
gagctcggtctcatgcgcgcgcccaacgagcgcgcgaccacgctgctcgacaccgtggcc
ggcaccatcggcagtgcggtcgcgggatcgcgctatcgcgaacagctgcaggacgtgctg
gccgaaacccagcaactgaacgaagagctgcaggtgcagcaggaagagctgcgcaccgcg
aatgaagaactcgaagagcagtcgcgcgtgctgcgccagtcgcaggcaacgctggaaaac
cagcaggccgaactggagcagaccaacagccagctgtcggagcgcaccgatgccctcgac
cagcgcaatgccgccctgaagcgcgtgcagctcgatctcgaagaccgcgccgaagaactg
caacgcgccagccgctacaagtcggagttcctcgccaacatgtcacacgagctgcgcacg
ccgctcaacagcgcgctcatcttgtccaagctgctgggcgacaacccgcagggcaacctg
acgcccgagcaggtgaagttcgcggagtcgatctactcgtcgggcaacgacctgctggtg
ctcatcaacgacatcctggacatcgccaaggtcgaggccggcaagctcgaagtgcagcca
gaagtggtggccgtcaacagcgtggccgagagcctgcgcatgacgttcacgccgctcgcc
aacgacaagaagctggcgttcgaactcgacgtcgcgcccgatgcgccggtcagcctggtc
accgatcggcagcgcgtcgagcagatcctgaagaacctgctctcgaatgcgctgaagttc
acggaccgcggtaccgtgcggcttcacgtctcggcacgagcgggcggcggtgcgcagttt
gcggtgagcgattccggcatcggcatcgcggtcgaccagcaggacgtgattttcgaagcc
ttccggcaagccgacggcaccaccagccggcgctatggcggcaccggcctcggcctgtcg
atctcgcgcgacctcacgcgcctgctcggcggcgagctgcaggtgcacagcgtgcccgga
caaggcagcaccttcacgctcgcactgccggccgacatcgcccagccgctgaccgccgcg
gagcgcagtgacggtgcggcaaccgcaccgcagcccaggccgctgcgcgccacgggcatg
ccggccgccaagcccgcggcctcaccgctcgtgcccgcgcccgacatcccgcagtttgcc
gacgaccgcgcgttgccgcccgacctgtcgcgccgcgtgctcgtcatcgaagacgagccg
cagttcgcgcacatcctctacgacctggcgcacgagctcggttaccgctgcctcgtggcg
cacggcgccgccgacggcttcgcgctggcgcggcagtacgtgcccgacgcgatcctgctc
gacatgcggttgcccgacagccccggcctcggcgtcttgcagcacttgaaggacgactcg
cacacgcggcatatcccggtgcacgtcgtgtcggcacaagaccagtccgaggcggcgctg
cacatgggcgcgatcggctacgcgctcaagcccgcatcgcgcgaccagttgaaggacgtg
ttcgccaagctcgaacagaagctctcgcaaaaggtcaagcaggtgctggtggtggaagac
gacgcactgcaacgcgacagcgtgatccacttgattgccgacgacgacgtggcgatcacc
gccgtgggcaccggcgaggaagcgctggcgctgctgcgcacccgggtgttcgattgcatg
atcaccgacctgaagctgcccgacctgcagggcagcgagttgctgcagcgcatggcgctg
gaagacatcgtgtcgttcccgcccgtcatcgtctacaccggccgcaacctcacgcgcgcc
gaagaggccgagctgctgcgctactcgcgctcgatcatcatcaagggcgcgcgttcgccc
gagcgcctgctcgacgaggtgacgctgttcctgcacaaggtcgaatcggaactgtcgagc
gaacgccagaccatgctgaagacggcgcgcgggcgcgaccgcgtgttcgaaggccgccgc
atcttgctggtggacgacgacgtgcgcaacatcttcgcgctgaccagcgcgctggagcag
cgcggcgcggtcgtcgaggtcggccgcaacggcatcgaggcgctcgccaagctcgacgag
gtgcccgacatcgacctggtgctgatggacgtgatgatgccggagatggacggcctcgaa
gccacgcgccggctgcgccaggacgcacgcttccagaagctgccggtgatcgccgtcacc
gccaaggccatgaaggacgatcaggagcagtgtctcgccgccggtgcgaacgactatctg
gccaagcccgtcgacctcgatcgcctgttctcgctgctgcgcgtctggatgccgaagatg
gagcggctgtga
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