Variovorax sp. PAMC 28711: AX767_05255
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Entry
AX767_05255 CDS
T04325
Name
(GenBank) type II secretion system protein F
KO
K02653
type IV pilus assembly protein PilC
Organism
vaa
Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vaa02044
]
AX767_05255
02035 Bacterial motility proteins [BR:
vaa02035
]
AX767_05255
Secretion system [BR:
vaa02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
AX767_05255
Bacterial motility proteins [BR:
vaa02035
]
Pilus system
Pilus assembly proteins
AX767_05255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF2207_C
DMAC1_Dmo2
Motif
Other DBs
NCBI-ProteinID:
AMM23818
LinkDB
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Position
1033949..1035169
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AA seq
406 aa
AA seq
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MATATSTRTLKEFVFEWEGKDRNGKAVRGEVRAAGENQVQASLRRQGVLASKIKKRRMRG
GKSIKPKDIAIFTRQLATMMKAGVPLLQAFDIVGRGNANPNVARLLNDIRSDVETGTSLS
AAFRKFPRYFDNLYCNLVEAGEAAGILEELLDRLATYMEKTEAIKSKIKSALMYPTSVVI
VAFVVVAIIMIFVIPAFKQVFSSFGADLPAPTLIVMAISEVFVAYWWLIFGVIGGGIYFF
MQAWRRNERVQKFMDRLLLRVPIFGTLIDKSCVARWTRTLATMFAAGVPLVEALDSVGGA
SGNSVYADATAKIQQEVSTGTSLTSAMTNANLFPSMVLQMTAIGEESGSIDHMLGKAADF
YESEVDDMVAGLSSLMEPIIIVFLGVIIGGIVVSMYLPIFKLGQVV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgccacatcgacacgcacgctcaaagaattcgtcttcgaatgggaaggcaag
gaccgcaatggcaaggcggtccgcggtgaggtccgggctgcgggtgaaaaccaggtgcag
gcttcacttcgcaggcaaggtgttctcgcgtcgaagatcaaaaagcgccggatgcgcggt
ggcaagtcgatcaaaccgaaagacatcgcgatcttcacgcgacagctcgcgaccatgatg
aaggccggcgtgccgttgctgcaggccttcgacatcgtcggtcgcggcaatgcgaatccg
aacgtcgcccgactgctcaacgacattcgaagcgatgtcgaaactggtacctcgctttca
gccgctttccgcaagttccccagatacttcgacaacctctattgcaatctggtggaagcc
ggtgaagccgccggcattctggaagaactgctcgaccgcctcgccacctacatggagaaa
accgaagcgatcaagtcgaagatcaagtcggcactgatgtatccgacatccgtggtgatc
gtcgcgttcgtcgtggtggccatcatcatgatcttcgtgattccggcgttcaaacaggtg
ttcagttcgtttggcgcagacctgccggcgcccaccctgatcgtgatggccatcagcgaa
gtttttgtcgcttattggtggctgatcttcggcgtcatcggcggcggcatctatttcttc
atgcaggcctggcggcgcaacgaacgcgttcagaagttcatggaccgcctgctgcttcgc
gtgccgatcttcggaaccctgatcgacaagtcgtgtgtggcccgctggacccgcacgctc
gcgacgatgttcgccgccggggtgccactggtcgaagcgctcgactccgtcggcggggct
tcgggaaattcggtctatgccgacgccacagcgaagattcagcaagaggtgtcgacaggc
accagcctgaccagcgcgatgaccaacgccaacctgttcccgtcgatggtcctgcagatg
accgcgatcggcgaagaatccggctccatcgatcacatgctgggcaaggcggcggacttc
tacgagtccgaggtcgacgacatggtcgccggcctgtccagcttgatggagcccatcatc
atcgtgtttctgggcgtgatcatcggcggcatcgtcgtgtcgatgtacctcccgattttc
aagctcggccaagtcgtttga
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