Variovorax sp. PAMC 28711: AX767_05615
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Entry
AX767_05615 CDS
T04325
Name
(GenBank) secretin
KO
K02666
type IV pilus assembly protein PilQ
Organism
vaa
Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vaa02044
]
AX767_05615
02035 Bacterial motility proteins [BR:
vaa02035
]
AX767_05615
Secretion system [BR:
vaa02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
AX767_05615
Bacterial motility proteins [BR:
vaa02035
]
Pilus system
Pilus assembly proteins
AX767_05615
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Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
AMIN
Secretin_N
STN
type_II_gspD_N0
Motif
Other DBs
NCBI-ProteinID:
AMM23880
LinkDB
All DBs
Position
complement(1102837..1104996)
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AA seq
719 aa
AA seq
DB search
MNRQNPITALWLRAAGVTLLALTSAVWVHAQNSIQAVTSSTQSGAEVLKIDLAQPLTVVP
TGFVIQTPARIALDFPGVINAIGRTAIDVNQGNLRSVNVVQAGERTRLVLNLKEATAYKT
EIQGKSLLVSLEPVAGTALAASTATAFAENRNRDMVPLRDVDFRLGSDNTGRVIVDLANN
QTGVDIRQQGKNLVVEFTKSTLPEGLRRRLDVADFGTPVQLITTQQSGDRVRMVIEPKGE
WEHSAYQSENQFVVEVRPRKIDPTKLTQGAGYNGEKLSLNFQNIDVRSLLQVIADFTNFN
IVTSDSVTGSLTLRLKDVPWDQALEIIMQAKNLGMRKNGSVLWIAPKDEINAKEKLDFEA
QAAIQNLEPLRTQSFQLNYTKALVIAQGLTGSGASSGGGGGSGSTTRILSARGSVIAEAR
TNQLFVSDIPSRLSQVAELIQKLDIPVRQVLIEARIVEASDTFGKSLGVKLGGGAVNNRN
SLGTFPSVTGGGTVTTNTNGVISSTSTSPTVTFPQFTQGNFINLPSTGVSGNGNAAGTFA
ISLFNSSFSRMLNLEISALEADGKGKVVSSPRVVTADQTKALIEQGTELPYQVATSSGAT
SIAFRKANLKLEVTPQITPEGNIILTLDVNKDTVGQATTAGFAINTKHVQTEVLVENGGT
VVIGGIFELTESNDESRIPVLGEVPVLGALFRTRNRVANKTEMLVFITPKMITDRNAAR
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgacaaaacccgatcaccgcactgtggctgcgcgccgcgggcgtgacccttctc
gcgctgacctcggccgtttgggtccatgcgcagaattccattcaagccgtcacgagctcg
acccagtcgggggctgaagtcctgaagatcgatctggcacagccgctcacggtcgtaccg
accggcttcgtcattcagacgccggcgcgcatcgcattggacttcccgggcgtgatcaac
gcgatcggccgcacggcgatcgacgtcaatcagggcaacctgcgttcggtgaacgtcgtc
caggcgggtgagcgaacacgtctggtgctgaacctgaaggaagccacggcgtacaagacc
gaaattcagggcaagtcgttgctggtgtcgctggagccggttgcaggcactgcactcgcc
gcctccaccgccacggcgtttgccgagaaccgcaaccgcgacatggtgcctttgcgtgat
gttgacttccgcctgggttcggacaacaccggccgcgtgatcgtcgatctcgccaacaac
cagaccggtgtggacattcgtcagcagggcaagaacctggtggtcgagttcaccaagtcg
acgttgccagaaggcctgcgccgccgtctcgacgtggccgattttggaacgccggtgcag
ctcatcaccacgcagcaatcgggcgaccgcgtgcgcatggtcatcgagccgaagggcgag
tgggaacacagcgcctaccagagcgaaaaccagttcgtggtggaagttcgcccccgcaag
atcgacccgaccaaactgacgcaaggcgctggctacaacggcgagaagctctcgctgaac
ttccagaacatcgacgtccgctcgctgctccaggtgattgccgacttcacgaacttcaac
atcgtgacctcggattcggtcaccggatcgctgacgctgcgcctcaaggacgtgccgtgg
gaccaggcgctcgaaatcatcatgcaggccaagaacctcggcatgcgcaagaacggcagc
gtgctgtggatcgcgcccaaggatgaaatcaacgccaaggaaaagctcgacttcgaagcg
caggcagcgatccagaacctggagccgctgcgcacgcaatccttccagctgaactacacc
aaggcgctggtgattgcccagggtctgaccggcagcggtgcttcgtcgggtggcggtggt
ggttcgggcagcacgacgcgcatcctgagtgcgcggggcagtgtcatcgccgaagcgcgc
accaaccaactgttcgtgtcggacattccgtcacgcctctcgcaggtcgccgaactgatt
cagaagctcgatatcccggtgcgacaggtgctcatcgaagcgcgcatcgtggaagcctcg
gacacgttcggcaagtcgctcggcgtgaagctcggcggcggcgcggtgaacaaccgcaac
tcgctcggcacgttcccctcggtcaccggtggcggcacggtcacgacgaacaccaacggc
gtgatcagctcgaccagcaccagcccgacggtcacgttcccgcagttcacccagggcaac
ttcatcaacctgccgtcgaccggcgtgtccggcaacggcaacgccgcaggcaccttcgcg
atttcgctgttcaacagcagcttttcgcgcatgttgaatcttgaaatttccgcgctcgag
gccgacggcaagggcaaggtcgtgtcgagcccgcgtgtggtgacggccgaccagaccaag
gcgctgatcgagcagggcaccgagctgccctaccaggtcgcgacgtcgagcggcgccaca
tcgatcgcgtttcgcaaggcgaacctgaagcttgaagtgacgccgcagatcacgcccgaa
ggcaacatcatcctgacgctggacgtcaacaaggacacggtcggccaggcgacgacggca
ggtttcgcgatcaataccaagcacgtgcagaccgaagtgctggtcgagaacggcggcacg
gtggtcatcggtggtatcttcgaactcaccgaatccaacgatgagtcgcgcattccggtc
ctgggtgaagtgcctgtcctcggtgcactgttccggacgcgcaaccgcgttgccaacaag
accgaaatgctcgtctttatcactccgaagatgattaccgaccgcaacgccgcgcgctga
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