Variovorax sp. PAMC 28711: AX767_05735
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Entry
AX767_05735 CDS
T04325
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vaa
Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaa02000
]
AX767_05735
Transporters [BR:
vaa02000
]
Other transporters
Pores ion channels [TC:
1
]
AX767_05735
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AMM26624
LinkDB
All DBs
Position
complement(1127937..1130018)
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AA seq
693 aa
AA seq
DB search
MGGAAHAQTVVAQEAPTLPAITVSTPRGTGSAFDVAGSVDRVDGAQLRDGNLQVNLSESL
ASVPGLQVQNRQNYAQDLQLSVRGFGARSTFGVRGVRIYVDGIPATLPDGQGQTSNIDIG
SADRVEVLRGPFSALYGNSSGGVMQVFTESGEGAPQLRYSFAAGSNGVLRQSLKLGGASG
AVDYLLSGSHFTTDGWRDHSAATRDIANGKLGIALDNGDRLTLVVNSVHLKAQDPLGLTA
DQYALAPRSAPLAVQYDTRKTVDQTQLGLLYERRIDANNDLRVMLYTGERRTTQYQAIPP
AAQLNALQAGGVIDLERRYGGIDVRWSGRLQLADRPFDLVAGLAYDSLREARTGYENYLG
RVAAPLLGVQGRLRRDERNTVWNLDPYAQATWRLTERWTVEAGVRRSSVHFDSQDRYLVG
ANGNDSGSARYSRTLPVASLRYQATPDIALYTSAGRGFETPTLNELSYRAGGQSGLNFAL
QPSVNDSVEVGAKARVAGGLLTAALFRTATRDEIVTNTNIGGRATFQNAGRTRRDGFEAA
WLHETANHWRTQLAYTWLDARYRDGFCSPAPCATRNTVAAGNRIPGIAQQSLFAAFGWVP
PEGWRAGAELRALGRIQANDVNTARAAGYAVAALHAGYVKRWERWELNAFARIDNLFDRR
YAGSVIVNESNARYYEPALGRNWTVGLGGTYRF
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgcggcccacgcgcaaaccgtcgtcgcgcaagaggcgcccacgctgccggcc
atcaccgtctcgacgccgcgcggcaccgggtcggcgttcgacgtggcgggctcggtcgat
cgcgtcgacggcgcgcaactgcgtgacggcaacctgcaggtcaacctctcggaaagcctc
gcgtcggtgcccggcctgcaggtgcagaaccggcagaactacgcgcaggacctgcagttg
tcggtgcgcggtttcggcgcccgctcgaccttcggcgtgcgcggcgtccgcatctacgtg
gacggcatccccgcgaccctgcccgacgggcagggccagacctcgaacatcgacatcggc
tcggccgaccgcgtggaagtgctgcgcgggccgttctcggcgctctacggcaactcgtcg
ggtggcgtcatgcaagtcttcaccgaaagcggggagggcgcgccgcaactgcgctattcg
ttcgcggccggcagcaacggcgtgctgcgccagagcctgaagctcggcggcgcctcgggc
gcggtcgactacctgctgagcggcagccacttcaccaccgacggctggcgcgaccacagc
gccgccacgcgcgacatcgcgaacggcaagctcggcatcgcgctcgacaacggcgaccgg
ctcaccctcgtggtcaacagcgtgcacctgaaggcgcaagacccgctcggtctcaccgcc
gatcaatatgcgctcgccccgcgcagtgcgccgctcgcggtgcagtacgacacgcgcaag
acggtcgaccagacgcagctcggcctcctgtacgagcggcgcatcgatgcgaacaatgac
ctgcgcgtgatgctctacaccggcgagcgccgcaccacgcagtaccaggcgattccgccc
gccgcccagctcaatgccttgcaggccggtggcgtgatcgacctcgaacgccgttatggc
ggcatcgacgtgcgctggagcgggcggttgcaactcgccgaccggccgttcgacctggtc
gccggcctggcctacgacagcctgcgcgaggcgcgcaccggctacgagaactacctcggt
cgtgtcgccgcgccgctgctcggtgtgcagggtcggctgcgccgcgacgagcgcaacacg
gtctggaacctcgacccctacgcgcaggcgacgtggcgcctcaccgaacgctggaccgtg
gaagcgggcgtgcgccgcagcagcgtgcacttcgattcgcaggatcgctaccttgtcggc
gccaacggcaacgacagcggcagtgcgcgctacagccgcacgctgccggtcgcgtcgtta
cgctatcaggccacgcccgatatcgcgctctacacctcggctggccgtggcttcgagacg
ccgacgctcaacgagctgtcgtaccgcgccggcggccagagcgggctcaacttcgcgctg
cagccttcggtgaacgacagcgtcgaagtgggcgcgaaagcgcgcgtggccggcgggctg
ctcaccgcggcgctgtttcgcaccgcaacgcgcgacgagatcgtgaccaacacgaacatc
ggcggacgcgcgaccttccagaacgccggccgcacccggcgcgacggcttcgaggcggcg
tggctgcacgagacggcgaaccactggcgcacgcagctggcctacacctggctcgatgcg
cgctaccgcgacgggttctgttcgccagcgccctgcgccacgcgcaacacggtcgcggcg
ggcaaccgcatcccgggcatcgcgcagcaatcgctgttcgcggcgttcggctgggtgccg
cccgaaggctggcgcgccggcgcggagctgcgcgccctcggtcgcatccaggccaacgac
gtgaacaccgcccgggccgcgggctacgcggtggcggccctccacgcgggctacgtcaag
cgctgggaacgctgggagctgaacgcctttgcgcgcatcgacaacctgttcgaccggcgc
tacgccggctcggtcatcgtgaacgaaagcaatgcgcggtactacgagccggcgttgggg
cgcaactggacggtgggcctgggcggcacctaccgtttttga
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