Variovorax sp. PAMC 28711: AX767_06925
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Entry
AX767_06925 CDS
T04325
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa00470
D-Amino acid metabolism
vaa00550
Peptidoglycan biosynthesis
vaa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AX767_06925
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AX767_06925
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vaa01011
]
AX767_06925
Enzymes [BR:
vaa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
AX767_06925
Peptidoglycan biosynthesis and degradation proteins [BR:
vaa01011
]
Precursor biosynthesis
Amino acid ligase
AX767_06925
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Sacchrp_dh_NADP
AlaDh_PNT_C
NAD_binding_8
2-Hacid_dh_C
ThiF
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
AMM24110
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Position
complement(1385863..1387707)
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AA seq
614 aa
AA seq
DB search
MKHLQDLHVLILGLGASGLAMARWCARHGAHVTVADTREAPPQLATLQHDVPAAVFVGGP
FSAALVDGTAVRAVYRSPGLSPAAIAPVVGAAKATGLTVGGELDLFALALRDLRTADVPP
PVAPVPQPQAEIEMAEQAPVVEAAVETEPQPEVEAEIEPPVALAPSEPEAPPAAPAAANS
VHTAARDAAAFVARIAELSAAPVVPVPEDDKPLPIAAPEPLPPEGYTPAVLAITGTNGKT
TVTALTGLLVECAGKTVAIAGNIGPTLLDTLAAHLDTDTLPEVWVLELSSFQLDGVQGFE
PTAATALNLTQDHLDWHGDMAAYAGAKARVFGEHGLMLLNRDDAGVMAMLPPPVRAKLQR
PLIREHVTFGAGMPLRPGDYGIERVNGMSWLVRALEADETQKRKRGAIVQEEIFLQRFLP
ADALRIRGQHNALNALAALALATAAGCQLAPMLYGLRDYRGEPHRVAPVAIVDAVEYFDD
SKGTNVGATVAALGGLGVERRVVVILGGEGKGQDFSPLAAPVAQFARAVVLIGRDAPLIA
AALEGTGVSLLNAGTLPEAVSLAAGRAHPGDAVLLSPACASFDMFRDYEHRADVFCEAVL
ALADAPRVNAGEAA
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatctgcaagaccttcacgtgctgatcctgggcctgggtgcctcgggcctggcc
atggcgcgatggtgcgcccgccacggtgcgcacgtgaccgtggccgacacgcgcgaagcg
ccgccgcagctggcgacgctgcagcacgacgtgccggcggcggtgttcgtcggcggaccg
ttctcggccgcgttggtcgacggtacggcggtgcgcgcggtgtaccgctcgccgggcctc
tcgcctgcggccatcgcaccggtggtcggcgctgcgaaggcgacgggcctcacggtgggc
ggcgagctggacctgttcgcgttggcgttgcgcgatcttcggacagccgacgtgccacct
ccggtcgcgcccgtgccgcaaccgcaggcggagatcgagatggccgagcaagcgccggtc
gtggaagcagcggtcgaaaccgagccacagcccgaggtcgaagccgaaatcgaacctccc
gtcgcgctcgctccaagcgaaccggaggcgccgcccgccgccccggctgctgcgaactcc
gtccacaccgccgcgcgcgacgccgccgcgttcgtcgcccgcatcgccgaactgtcggct
gccccggtcgtcccggtgccggaagacgacaagccgttgccgatcgccgcgcccgaaccg
ctgccgcccgagggctacaccccggcggtgctcgccatcaccggcaccaacggcaagacc
accgtcacagcgctgacgggcctgttggtcgaatgcgcaggcaagaccgtggcgatcgcc
ggcaacatcggcccgacgctgctcgacacgctggctgcgcacctcgataccgacacgttg
cccgaggtgtgggtgctcgaactgtccagcttccagctcgacggcgtgcagggtttcgag
ccgaccgccgccaccgcgctcaacctgacacaggaccacctcgactggcacggcgacatg
gctgcctatgccggcgccaaggcgcgggtgttcggcgagcacggcctgatgctgctcaac
cgcgacgacgccggcgtgatggcgatgctgccgccgccggtgcgcgccaagctgcagcgt
ccgctgatccgcgagcacgtcactttcggcgccggcatgccgctgcgaccgggcgactac
ggcatcgaacgcgtgaacggcatgagctggctggtgcgtgcgctggaagccgacgaaacg
caaaagcgcaagcgcggcgccatcgtgcaagaagaaattttcctgcaacggttcctgccg
gccgatgcgctgcgcattcgcggccagcacaacgcgctgaatgcactggcagcgctggcg
ctcgccacggcggcgggctgccagctcgcgccgatgctctacggcctgcgcgactaccgc
ggcgagccgcaccgcgtggcgccggtcgccatcgtcgacgcggtcgagtacttcgacgac
agcaagggcacgaacgtcggcgccacggtggccgcgctcggtggcctcggcgtcgagcgc
cgcgtggtcgtcatcctgggcggcgaaggcaaggggcaggacttctcgccgctggctgcg
ccggtggcccagttcgcccgcgccgtggtgttgatcgggcgcgatgcgccgctcatcgcc
gctgcgctcgaaggcaccggcgtgtcgttgctgaacgccgggacattgcccgaagcggtg
tcgctcgcggcgggccgcgcgcaccccggtgacgccgttctgctgtccccggcgtgcgcc
agtttcgacatgttccgcgactacgaacaccgcgccgacgttttttgcgaagcggtcctg
gcgctcgccgatgccccgcgcgtaaacgctggagaagctgcatga
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