Variovorax sp. PAMC 28711: AX767_07945
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Entry
AX767_07945 CDS
T04325
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa00061
Fatty acid biosynthesis
vaa00071
Fatty acid degradation
vaa01100
Metabolic pathways
vaa01212
Fatty acid metabolism
vaa02024
Quorum sensing
vaa04146
Peroxisome
Module
vaa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AX767_07945
00071 Fatty acid degradation
AX767_07945
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AX767_07945
09145 Cellular community - prokaryotes
02024 Quorum sensing
AX767_07945
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vaa01004
]
AX767_07945
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vaa04147
]
AX767_07945
Enzymes [BR:
vaa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AX767_07945
Lipid biosynthesis proteins [BR:
vaa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AX767_07945
Exosome [BR:
vaa04147
]
Exosomal proteins
Exosomal proteins of breast milk
AX767_07945
Exosomal proteins of breast cancer cells
AX767_07945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AMM24288
UniProt:
A0A126ZAZ0
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All DBs
Position
1593361..1595316
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AA seq
651 aa
AA seq
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MTLSTAVRPPTFPRLLLAHAATRPDAPAVREKDLGIWQTWSWQAVAQEVREIACGLASLG
FEAFDNLAIVGANRPHLYMAVLAAQSLRGVPVPLYQDAVAEEMVFMLEDAAIEFVVVEDQ
EQVDKLLECRETRPGIRHIIYDDPKGLRHYDQPGLISYDTLRELGRAFDLAHPGHYDRAV
ASGEATDVGVILYTSGTTGRPKGVCQTHASFIASGRGGVETDRLGPGDNIMSYLPMAWVG
DHLFSVAQWLVGGFTLNCPESAETVMNDMREIGPSYYFGPPRTFEGLLTAVSIRMEDAAR
PKRWLYAKFMALAQRVGADLLNGASVGAGDRFMYAIGNALVYGPLRNVLGMSRIRVAYTA
GAAIGPDLFRFYRSIGVNLKQFYGQTETCAYVCLQQDGKVKLSTVGTAAPGIELKIAADG
EVLVRGVSVLKEYYKRPDATAEVLDADGFFHTGDAGVLDNEGHLRIIDRAKDVGRLTNGA
IFAPNYIENKLKFFPQIKEAVCFGNHRDAVCAFINIDFDAVGNWAERRGLAYGGYIDLAA
KPEVLGLIGECIAKVNADLATEDGMGETQIARFLVLHKELDPDDDELTRTRKVRRGFIAE
KYAVLVDALYGGKTEQYIETQVKFEDGRTGVVNATLTIVEAATFPVVKAAA
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
gtgaccctatccaccgccgttcggccacccacttttcctcgccttttgctcgcgcacgcg
gcgacgcggcccgacgcgccggccgtgcgcgaaaaggacctcggcatctggcaaacctgg
agctggcaagcggtcgcgcaggaagtgcgcgagatcgcgtgcggcctcgcgagcctcggc
ttcgaggcgttcgacaacctcgccatcgtcggcgccaaccggccgcacctctacatggcg
gtgctcgcggcgcagagcctgcgcggcgtgccggtgccgctctaccaggatgccgtcgcg
gaagagatggtcttcatgctggaagacgcggccatcgagttcgtggtggtcgaggaccag
gagcaggtcgacaagctgctcgagtgccgcgagacgcgtcccggcatccgccacatcatc
tacgacgaccccaaagggctgcgccactacgaccagccgggcctcatcagctacgacacg
ctgcgcgaactcggccgcgcgttcgacctggcgcaccccggccactacgaccgcgcggtg
gcgagcggcgaggccaccgacgtcggcgtgatcctctacacctcgggcaccacgggccgg
cccaagggcgtgtgccagacgcacgcgagcttcatcgcatcggggcgcggcggcgtcgag
accgaccggctcggccccggcgacaacatcatgagttacctgccgatggcgtgggtgggc
gaccacctgttctcggtggcgcagtggctggtcggcggcttcacgctcaactgccccgag
tcggccgagacggtgatgaacgacatgcgcgagatcggcccgagttactacttcgggccg
ccgcgcaccttcgagggcctgctgaccgccgtgtcgatccgcatggaagacgcggcccgc
ccgaagcgctggctctatgcgaagttcatggcgctggcgcagcgcgtgggcgccgacctc
ctcaacggcgcgtcggtgggcgcaggcgatcgcttcatgtatgcgatcggcaatgcgctc
gtgtacgggccgctgcgcaacgtgctgggcatgagccgcatccgcgtggcctacacggcg
ggggccgcgatcggccccgacctgttccgcttctaccgctcgatcggcgtcaacctgaag
cagttctacggccagaccgaaacgtgtgcgtacgtgtgcctgcaacaagacggcaaggtg
aaactctcgaccgtcggcaccgcggcgccgggcatcgaactgaagatcgcggccgacggc
gaagtgctggtgcgcggcgtgtcggtgctcaaggaatactacaaacgccccgatgcgacc
gccgaggtgctcgatgccgacggcttcttccacaccggcgacgccggcgtgctcgacaac
gaaggccacctgcgcatcatcgaccgcgcgaaagacgtggggcgcctcacgaacggcgcg
atctttgcgcccaactacatcgagaacaagctcaagttctttccgcaaatcaaggaagcc
gtgtgtttcggcaaccaccgcgacgcggtatgcgccttcatcaacatcgacttcgacgcg
gtcggcaactgggccgaacggcgtggcctcgcctacggcggctacatcgacctggcggcc
aagcccgaagtgctcggcctcatcggcgaatgcatcgcgaaggtgaatgccgacctcgcc
accgaagacggcatgggcgagacgcagatcgcgcgcttcctcgtgcttcacaaggagctc
gaccccgacgacgacgagctgacccgcacgcgcaaggtgcgccgcggcttcatcgccgag
aaatacgccgtgctggtcgatgcgctctacggcggcaagaccgagcagtacatcgaaacg
caggtgaagttcgaggacggccgcaccggcgtcgtcaacgccacgctgacgatcgtcgag
gccgccacctttcctgtcgtgaaggccgccgcatga
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