Variovorax sp. PAMC 28711: AX767_07990
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Entry
AX767_07990 CDS
T04325
Name
(GenBank) LysR family transcriptional regulator
KO
K05596
LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
Organism
vaa
Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vaa03000
]
AX767_07990
03036 Chromosome and associated proteins [BR:
vaa03036
]
AX767_07990
Transcription factors [BR:
vaa03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AX767_07990
Chromosome and associated proteins [BR:
vaa03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
AX767_07990
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Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
P22_Cro
Cro
Motif
Other DBs
NCBI-ProteinID:
AMM24296
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Position
complement(1603974..1604870)
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AA seq
298 aa
AA seq
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MLDYSALSALAAVVREGSFDRAASALHVTPSAISQRVRLLEERMGCALVVRDQPCRATEA
GRRLCQHVDRVRLLEQDLSDAVPSLVSDRAARVQLPVAVNADSLATWFAPAVAIFAADAP
VLVEIAVDDQDHTAEWLRSGVVMAAVTGGARPAAGCNSQALGAMRYVAAASPAFRARHFA
EGVGAASLAVAPSLVFNTKDALQSQWARRLCHRHVELPRHVVPSSHAFVTAALAGMGWGL
HPLSLIAQHLKDGSLVDLAPTMPLDVPLYWQQARAASALLESLTRQVVAAASRALLPP
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgctcgactattcagcactgtccgcgcttgctgcggtggtacgtgaaggcagttttgat
cgcgcggccagcgcgcttcatgtcacaccgtccgccatttcccagcgcgtgcgactcctg
gaggagcgcatgggttgcgcgctcgtggtgcgcgatcagccctgccgcgcaacggaagca
ggacggcgcctttgccagcacgtcgatcgcgtcagattgctcgaacaagacctctcggat
gccgttccgtcgctggtgtcggacagggctgcgcgggtccagttacccgtcgcggtcaac
gccgacagcctcgcaacgtggtttgcgcccgccgtggcgatcttcgcggccgacgcaccc
gttctcgtcgaaatcgcggtggacgaccaggaccacacggccgagtggctgcgcagtggc
gtggtgatggcggccgtcaccggcggtgcccgaccggcggcggggtgcaacagccaggca
ttgggggcgatgcgctacgtggcggcagccagtcccgccttcagggcgcggcatttcgct
gaaggcgtgggtgcggccagcctggccgtggcgccgagcctcgtcttcaacaccaaggac
gcgttgcagagccagtgggcgcgccgcctgtgccatcggcatgtcgagttgccccgacac
gtcgtcccgtcgtcccatgcgttcgtgacggccgcattggccgggatgggctggggcctg
catccgctgtccctgatcgcgcagcacttgaaggatggctcgctggtcgacctggcgccg
acgatgcccctggatgtgccgctgtactggcaacaggcgcgcgccgcctccgcgcttctt
gagagcttgacgcggcaggtggtcgcagcagccagccgggcgctgttgccaccctga
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