Variovorax sp. PAMC 28711: AX767_08995
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Entry
AX767_08995 CDS
T04325
Name
(GenBank) peptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa00550
Peptidoglycan biosynthesis
vaa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AX767_08995
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vaa01002
]
AX767_08995
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vaa01011
]
AX767_08995
Enzymes [BR:
vaa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AX767_08995
Peptidases and inhibitors [BR:
vaa01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
AX767_08995
Peptidoglycan biosynthesis and degradation proteins [BR:
vaa01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
AX767_08995
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
DUF6206
Motif
Other DBs
NCBI-ProteinID:
AMM24473
LinkDB
All DBs
Position
complement(1792445..1793617)
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AA seq
390 aa
AA seq
DB search
MNRFSNALRALMLAAAASLSLIAAAQTVPAPPEVAARSYLLLDVTANQFLAQKDIDMPVE
PASLTKLMSAYVVFDALRAKKITLAQTMPVSQRAWKMPGSRMFIDPKMQVPVEDLIKGLI
VQSGNDATVALAEGVGGTVEHFVELMNDQAKALGMKNTTYKNPEGLTAPGHTTTARDLSI
LATKLIRDFPEEAKYYAIKKYRYAGTPSTNDTNRNMLLFRDPTVDGLKTGHTEAAGFCMI
ATAKRDFPNIPGGRRLLSIVLGASSEISRANESQKLLNWGYTAYDGVRLFDANQPVATPA
IWKGKVNTVKLGRPEAIVVAVPAGSASKIKTQIARPDPLVAPLAKYQAVGSLKISLGDQQ
VADVPLVALEGVDQAGIMGRAWDAVRLWIK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtttttccaacgcgcttcgcgcgctgatgctggccgccgccgcatccctcagt
ttgatcgccgccgcccagacggtgccggccccgcccgaagtggccgcgcgcagctacctg
ctgctcgacgtcaccgccaaccagtttttggcgcaaaaagacatcgacatgccggtcgag
ccggcgtcgctcaccaagctgatgtcggcctatgtggtgttcgacgcgctgcgcgccaag
aagatcacgctcgcgcaaacgatgcctgtgtcgcagcgcgcctggaagatgcccggctcg
cgcatgttcatcgacccgaagatgcaggtgccggtcgaagacctgatcaagggccttatc
gtccagtcgggtaacgatgcgacggtggcgttggctgaaggtgtcggcggcacggtcgag
catttcgtggaactcatgaacgaccaggccaaggcgctgggcatgaagaacacgacctac
aagaaccccgaaggcctgaccgcgccgggccacacgaccacggcccgcgacctgagcatc
ctggcgaccaagctcatccgcgatttcccggaagaggcgaagtactacgccatcaagaaa
taccgctacgccggcacgccttcgaccaacgacaccaatcgcaacatgctgctgttccgc
gacccgacggtggacggtctcaagaccgggcacaccgaggccgctggcttttgcatgatc
gcgacggccaaacgcgacttcccgaacatccccggcggccgccgcctgctgtcgatcgtg
ctcggcgcgtcgagcgaaatttcgcgtgccaacgaatcgcaaaaactgctgaactggggc
tacacggcctatgacggcgtgcgccttttcgatgccaaccagcccgtcgcgaccccggcg
atctggaaggggaaggtcaacacggtcaagctggggcggcccgaggccatcgtggtggcg
gtgccggccggctcggccagcaagatcaagacgcagattgcacgccctgacccgctcgtc
gcgccgctcgcgaaataccaggcagtcggctcgctcaagatatccctgggcgatcagcaa
gtcgcggacgtgccgctggtggcactcgaaggcgttgatcaggccggcatcatgggccgt
gcctgggacgctgtccggctctggatcaagtag
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