Variovorax sp. PAMC 28711: AX767_09465
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Entry
AX767_09465 CDS
T04325
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
vaa
Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaa02000
]
AX767_09465
Transporters [BR:
vaa02000
]
Other transporters
Pores ion channels [TC:
1
]
AX767_09465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
Motif
Other DBs
NCBI-ProteinID:
AMM24550
UniProt:
A0A126ZBP6
LinkDB
All DBs
Position
complement(1887705..1891247)
Genome browser
AA seq
1180 aa
AA seq
DB search
MRIANTMALGNNTVATAVGGVALGNASAASTAAGILGYMPSNADAAQIAAITATKGTQGA
LSVGNAAGGIFRQINAVAAGTADSDAVNVSQLKAAEAVAAANKTKYYSVNSTGGTNEDNL
GAAGADAIASGKNASVAASSKNAIAMGVGAKVLTNSASSVAIGDTATATGSGSVALGLNA
QALGSTAIVNTYADGTVAIGNGATANDSLTVAVGTRSKATATSASALGVGSIASGVQSTA
IGYESKALNSDATALGTGSTASGSTSTALGAGSTASGSGAVAVGNGATASNTTAIAIGAA
AGASSSGAVGIGFLSKANVSDSVALGSNSVASIAGGAAGYVPTNADTAQTAAIAATASKT
YGAISVGNATTKQYRQITNVAAGTLNTDAVNVSQLKAVEGTVAANKTKYYSVNGTATGVG
SNVNNDGATGLQSMAAGELSSAAGNLSVAMGAVSEASGPGGTALGANSTAASEGATAVGY
AAYVGGKDGTAIGHGAAASFAETVAIGHDTQDSAINSVLVGARANGAANSTALGYQAKAV
ANVGDVALGANSVTAAVVNTAGTTIRGTPYVFAGTDATSTVSVGTGAAVNGVRTVTNVAA
GRISGTSTDAINGSQLYATNDAINNLSTTVAANKTKYYSVQGVSSGVGSNADNDGATGLQ
AMAAGEKASAGGDFAVAMGTEAKASAAGGVAIGSNASAVGTGGATAVGYGSWAGDFGSTA
LGYGAMAQFADTVAIGHDTQDSAANSVLVGARAGGAANSTALGYEAKANVLNSVALGAGS
VSDRAIAGTSGQITSSTALIPYNTTDRTLLGAVSVGNATSYRQITNVADGTEAQDAVTLR
QLTGALGSFAVTPTKYFHANSSAPDSLAVGMESVAVGPQTVVNGNNGVGIGNGATVQASA
PGGIAIGQAARSVSADSIALGTQASALGVQGVAIGAGSVVNTAGGVALGAGSVASTVPGA
AGYVPNGASTAQTAAINATTSTLAGVSVGNAAAGQFRQINGVAAGTVDSDAVNVSQLKAV
QTTVQNIDNTAVKYDTNANGTTNYNSVSLGGSNTTGPVSVHNVAPGVAGTDAVNVNQLNS
GVASANAYTNTRAAQLDNRIDSVSKNAYAGVAAAMAVQMPASYVPGKTVMRIGYGVFKGE
SAVGVSMRRTADNNGWSLTGGVGLSRAGVAATVGAEWVFN
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaatcgccaacaccatggcgttgggcaacaacaccgtggcgaccgctgtgggtggc
gtggcattgggcaatgcgtcagccgcgagcaccgcagcagggattctcggctacatgccg
tcgaatgcagacgccgcacagattgcagccatcacggcaacgaaaggtacgcagggcgcg
ctgtccgtcggcaatgcggccggcggcatcttccgccagatcaatgcggtcgcggcgggc
accgcagacagcgacgcggtcaacgtttcgcagttgaaagccgccgaagccgtggctgcc
gcgaacaagaccaagtactacagcgtcaattcgaccggtggaaccaacgaggacaacctc
ggcgctgcgggtgccgacgcgatcgcctcaggcaagaatgcgtcggtggcggccagcagt
aaaaacgcgatcgccatgggcgtgggtgccaaggtgctgaccaattcggcaagcagcgtc
gccatcggcgacactgcgaccgcgacgggctcgggttcggtcgccttgggcctgaacgcg
caggcactggggtcaactgccatcgtcaacacttatgcggacggcacggtcgcgatcggc
aacggcgcgactgccaacgactcgctgacggtggcggtcggcacgcgcagcaaggcgaca
gccaccagtgcgtctgcactgggcgttggcagcatagcgagcggcgtgcagtcgaccgcg
atcggctatgaaagcaaagcgttgaactcagatgccaccgcgttgggcaccggcagcacc
gcgtctggcagtaccagcacggcccttggcgctggcagcacggcttcaggcagcggcgcg
gtcgcggtcggcaatggcgcgaccgccagcaacaccaccgccatcgcgatcggcgcggcg
gcgggcgcgtcgagcagcggggcggtgggcatcggctttctgagcaaagccaacgtgtcc
gactcggtggcgctgggttccaattctgttgccagcatcgccggcggtgcggcagggtat
gtgccaaccaatgccgatactgcgcagaccgcggcgatcgctgcgaccgccagcaaaacc
tatggtgccatctcggtcggtaacgcgaccacgaagcagtaccgccagatcaccaacgtc
gcggccggcacgttgaacaccgatgcggtgaatgtgtcgcagctgaaggcggtggagggc
acggttgccgccaacaagaccaagtactacagcgtgaacggcacagcgaccggcgtggga
agcaatgtcaacaacgacggcgcgaccggtctgcaatcgatggccgccggcgagctttcg
agcgcggcaggcaacctcagtgttgcgatgggcgcggtgagtgaggcgtcgggcccaggt
ggcacagcactcggtgccaattcgactgcggccagtgagggcgccacagcggtgggctat
gcggcctatgtcggcgggaaagacggcaccgccatcgggcatggcgcggccgcttctttt
gcggaaaccgtggccatcgggcacgacacgcaagacagtgcaatcaattcggtgttggtc
ggcgcacgtgccaacggtgctgccaactccaccgcgctgggctaccaggccaaagcggtg
gccaacgtcggcgacgtggcgctcggcgccaactcggtcacggcggccgtggtgaacacc
gcgggcacgaccatccgcggcaccccgtacgtcttcgccgggaccgacgcgaccagcacg
gtcagcgtgggcacgggcgcggcagtgaacggcgtgcgcaccgtcaccaatgtcgctgct
ggccggatcagcggaaccagcaccgatgccatcaatggctcgcagctgtacgcgacgaac
gacgcgatcaacaacctgtcgaccacggtggcggccaacaagaccaagtactacagcgtg
caaggcgtgagctccggggtagggagcaacgccgacaacgacggcgcgacggggctacag
gccatggccgccggtgaaaaggcatccgcagggggcgacttcgcggtcgcgatggggacg
gaagccaaggcttcggccgctggcggtgtagcgattggctctaacgcgtcggcggtcggc
actggcggcgctacagccgtcggctacggcagctgggccggcgatttcggcagcacggcg
ttgggctacggcgccatggcccagtttgcggacactgtggcgatcggccatgacacgcaa
gacagcgcagccaattcggtcctcgtcggtgcacgcgcaggcggcgccgccaattccacc
gcattgggttacgaggccaaggccaacgttctcaattcggtcgccttgggggcaggctcc
gtttccgaccgcgccatcgccggcaccagcggccagatcacctcgagcaccgcgctcatc
ccctacaacaccacggaccggacgctgctcggcgcggtctccgtgggcaacgccacgagc
taccgtcagatcacgaacgtggcggacggtaccgaggcgcaagacgccgtcacgctgcgc
cagctgaccggcgcactgggttcctttgctgtcacgccgacgaagtacttccatgccaac
tccagcgcgccggactcgctggcggttggcatggagtccgttgcggtcggaccgcaaacg
gtggtcaacggcaacaacggcgtgggcatcggcaacggcgccacggtgcaagcctcggcc
ccgggcggcatcgccatcggccaggcggcgcgcagcgtgtcggcggactcgatcgcgctg
ggcacccaggccagcgcgctgggcgtgcagggcgtggcgatcggcgcgggcagcgtggtc
aacaccgcgggtggcgtggcgctgggtgcaggctcggtcgccagcacggtgcccggtgcc
gccggctacgtgccgaacggtgccagcacggcgcagaccgccgccatcaacgcgacgacc
agcacgctggccggcgtgtcggtcggcaacgcggcggcaggccagttccgccagatcaac
ggtgtggccgcgggcacggtcgacagcgatgcggtcaatgtgtcgcaactcaaggcggtg
cagaccacggtgcagaacatcgacaacacggcggtgaagtacgacaccaacgccaacggc
acgaccaactacaacagcgtgtcgctgggcggcagcaacacgacgggaccggtctcggtg
cacaacgtggcacccggcgtggcgggcaccgacgcggtcaacgtgaaccagttgaacagc
ggcgtggcatccgccaacgcgtacacgaacacccgggccgcgcagctcgacaaccgcatc
gacagcgtctcgaaaaacgcctacgccggtgtcgccgccgccatggcggtgcagatgccg
gccagctacgtgccgggcaagacggtcatgcgcatcggatacggcgtcttcaagggcgaa
agcgctgtcggcgtgagcatgcgccgcacggcggacaacaacggatggagcctgacgggc
ggcgtgggcctgagccgcgccggcgtggcggccaccgtgggcgccgaatgggtcttcaat
tga
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