Variovorax sp. PAMC 28711: AX767_09485
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Entry
AX767_09485 CDS
T04325
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
vaa
Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaa02000
]
AX767_09485
Transporters [BR:
vaa02000
]
Other transporters
Pores ion channels [TC:
1
]
AX767_09485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
ESPR
YadA_anchor
Motif
Other DBs
NCBI-ProteinID:
AMM24554
UniProt:
A0A126ZDA0
LinkDB
All DBs
Position
complement(1893896..1897417)
Genome browser
AA seq
1173 aa
AA seq
DB search
MNKSYRSIWNEALGAWVAASEAVKSQGKRSGSIALIATTLAMGSSLAMAGDVVQTTGGTL
GATATGTSAIALGNNAQAAGTSMTAIGGSAGTGTTGQDIVVIGNGAGQNMNGAYITVIGN
GAGTKMQGQYNSVLGYLSGQDVTGDSNTLLGGYAAGNGTKGSLNTSLGSFSGQGVVGDRN
TNVGTRAGQNWAGAAGGNDNTAVGYRAGQNASSSGNTALGDAAGNYVTGGGKAYQLTTAE
GWTMNGVFNNAFGAGAGQFVSGADNSAMGTNAGVGVTGSGNVAVGKNAGSATITPGGTVV
CVPLVDGCNQAGTKVGTLAINDTVAFGTNALANSDKAVAIGANSSATGVGNIALGSNSIA
NGATLGTAAFVPTGSLITAIKAPTATSEISIGTAGAERRITNVAAGGADTDGVNVSQLKA
LDDRTVKYDGSLGDPKNTVTLAGATSADGGLTGGTKITNLSQGAVNATSTDAINGAQLFQ
ITGPVDNTYITNNGKGVRYVRTNDTGLALDDAHAQAVGSSALGYNATASAANAVAIGRGA
TASIADSVALGSNATTTAAVNTASATIGGTPYNFAGGTSVGVVSVGALGSTRQIQNVSAG
QLSMTSTDAVNGSQLNATNLAVNNLFNGGTKYFHANSVLADSQAIGAESVAAGPRAVASG
KNSVAIGSNANVTGDNSIALGNDSVATGATIAKTGWQPLSATGVALPIVGTTAIGEVSVG
SAGKERRITNLAAGADDTDAVNLSQLKAVDGKIVNISNGAAGMFQVSQDYNSPPPLPTGT
KSVAGGANAKASGNSAMALGNDSTASSTGSTAVGNGATSSGAGSVALGQGANDGGRGAES
YTGKYSNAVNNTVGTVSVGNAATGETRTISNVADGKLATDAVNLRQLDGAVKEANTYTDG
RITEIAGDITNINNGAKGMFQVSQDTNTPPPSPTGLNSAAGGAGSVASGNNSTAVGNSST
ASGVNSTALGNGASATAANSVALGMGSVADRANSVSVGSVGNERQITNVKAGVADTDGVN
VSQLKGTVKYDTNVDGSTNYNGVTLGNNTGPVSVHNVAPGVAGTDAVNVNQLNAGVASAN
AYTNQQVAAVQGQIDGVAKKAYAGAAAAMAMESAPYVAGKLTYSAGLGYYQQQTAAAVTL
RRTADNGRWSITGGVSVSSGGVGARVGISGVFN
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtcatatcggtcaatctggaatgaggcgctcggcgcctgggtcgcggcttcg
gaagccgtcaagtcacagggcaagcgcagcggctcgatcgcgctgatcgccaccacgctg
gccatgggcagctcgcttgcgatggcgggtgatgtggtgcagacgacggggggcacgttg
ggtgcaacggcgaccggtacttccgccattgcgctgggcaacaacgcccaggcggccgga
accagcatgaccgcgatcggcggttcggcaggcacgggcaccacggggcaggacatcgtg
gtgatcggcaacggcgctggtcagaacatgaacggcgcgtacatcactgtcatcggcaac
ggcgctggtaccaagatgcaagggcagtacaactctgtcctcggatacctttcgggccag
gatgtcaccggcgattccaatacgctgctgggcggctacgccgcaggcaacggcaccaag
ggcagcctgaacaccagcctcggcagcttcagcggccagggcgttgtcggcgatcgcaac
accaatgtcggcacccgtgcgggtcaaaactgggccggcgcagccggcggcaacgacaac
acggcggtgggctaccgggccggccagaacgcctcgtcgagcggcaacaccgcactcggc
gatgccgccggcaactatgtgacgggtggcggcaaggcgtaccagctcactacggctgaa
ggctggaccatgaatggcgtcttcaacaacgcattcggcgcgggcgcgggccagttcgtc
agcggtgccgacaactcggccatgggcacgaacgccggtgtcggcgtgaccggcagcggc
aacgtggcggtcggcaagaacgccggcagcgccaccatcacgccgggcggcacagtggtg
tgcgtgcctttggtcgatggttgcaatcaggccggcacaaaggtcggcacgctggccatc
aacgacaccgtcgccttcggcaccaacgccctggccaactcggacaaggctgtcgccatc
ggcgcgaactcatcggccaccggcgtgggcaacatcgccctgggctccaactcgatcgcc
aacggcgccacgctcggcaccgccgccttcgtgcccaccggcagcctgatcaccgccatc
aaggcccccacagccaccagcgaaatttcgatcggcacggccggcgcggaacgccgcatc
accaacgtcgccgctggcggcgcggacaccgacggcgtcaacgtgagccagctgaaggcg
ctcgacgaccgcacggtgaagtacgacggctcgctcggcgacccgaagaacaccgtcacg
ttggccggcgccacttcggcggacggcggcctgaccggcggcaccaagatcaccaacctg
agccagggcgccgtgaacgcgaccagcaccgacgcgatcaacggcgcgcagctgttccag
atcaccggcccggtcgacaacacctacatcaccaacaacggcaagggcgtgcgttatgtg
cgcaccaacgacaccggcttggcactcgatgacgcacacgcacaagcggtgggctccagc
gccctcggctacaacgccaccgcctcggctgccaacgcagtggccatcggccgcggcgcc
accgccagcatcgccgacagcgtcgcgctgggcagcaacgcaacgacgaccgccgcagtg
aacaccgccagcgccaccatcggcggcacgccgtacaacttcgccggcggcacgtcggtc
ggcgtggtgtcggtgggtgcgctgggcagcacgcgccagatccagaacgtctcggccggc
caactgagcatgacctcgactgacgcggtaaacggctcgcaactcaacgccacgaacctg
gctgtcaacaacctcttcaacggcggcaccaagtacttccacgccaactcggtgctggca
gacagccaggccatcggtgcggaaagcgtggcggccggcccgcgcgctgtcgcctcgggc
aagaacagcgtggcgatcggttcgaacgccaacgtcacgggtgacaacagcatcgccctc
ggcaacgactcggtggccaccggcgccacgatcgccaagaccggctggcagccgctgagc
gcgaccggcgtcgccctgccgatcgtcggtacgaccgccatcggcgaagtgtcggtcggc
tcggccggcaaggagcgccgcatcaccaacctggccgcaggcgccgacgacaccgatgcc
gtcaacctgagccagctcaaggcggtggacggcaagatcgtcaacatctccaacggcgcg
gccggcatgttccaggtcagccaggactacaactcgccgccaccgctgcccaccggcacc
aagtcggtggcgggcggtgcgaatgcgaaggcctccggcaacagcgcgatggcgctgggc
aacgacagcaccgcatcttcaaccggcagcacggccgtgggcaacggcgccacgtcatcg
ggtgccggttcggtcgccctcggccaaggcgcgaacgacggcggccgcggcgcagaaagc
tacaccggcaagtactcgaacgcggtgaacaacacggtcggcacggtgtcggtcggcaac
gcggcgaccggcgagacccgcaccatcagcaacgtggccgacggcaagctggccaccgac
gcggtcaacctgcgccagctcgacggcgcggtgaaggaagccaacacctacaccgacggc
cggatcaccgaaattgccggtgacatcaccaacatcaacaacggtgccaagggcatgttc
caggtcagccaggacacgaacaccccgccgccgtcgccgaccggcctcaactccgcagcg
ggcggcgcaggctcggtggcgtcgggcaacaacagcaccgcggtcggcaacagctcgacg
gcctccggtgtcaacagcacggcgctgggcaacggcgcgtcggccacggccgccaactcg
gtggccctgggcatgggctcggtggcagaccgcgccaactcggtgtcggtcggctcggtc
ggcaacgaacggcagatcaccaacgtgaaggccggcgtggccgacaccgacggcgtcaac
gtctcgcagttgaagggcacggtcaagtacgacaccaacgtcgatggcagcaccaactac
aacggcgtgaccctcggcaacaacaccgggcccgtctcggtccacaacgtggcacccggc
gtggccggcaccgatgcggtcaacgtcaaccagttgaacgcgggcgtcgccagtgccaat
gcgtacaccaaccagcaggtcgctgcggtgcagggccagatcgacggcgtggcgaagaag
gcttacgccggtgccgccgccgccatggcgatggaaagcgcgccttacgtggccggcaag
ctgacctactcggcaggcctcggctactaccagcagcagacggctgcagcggtgacgctg
cgccgcaccgccgacaacggtcgctggagcatcaccggcggcgtgtcggtctccagcggc
ggtgtgggtgcgcgtgtcggtatctccggcgtcttcaactga
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