Variovorax sp. PAMC 28711: AX767_10290
Help
Entry
AX767_10290 CDS
T04325
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
vaa
Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaa03400
]
AX767_10290
Enzymes [BR:
vaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
AX767_10290
DNA repair and recombination proteins [BR:
vaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
AX767_10290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AMM24696
UniProt:
A0A126ZCK2
LinkDB
All DBs
Position
complement(2079231..2080778)
Genome browser
AA seq
515 aa
AA seq
DB search
MKRHLRHLVLVLGDQLSVDSAAFEGFDPLCDRVLMVEARDESEHVPSTKMRTAVFLSAMR
HFAEAVTARAWPLDYLRLGTHRFDTVADALADALARHRPDALVMVEAGEWRLEQAIAGCC
AEAGVRVDMRDDLHFMASRRDFIDDARGKQRLVMEAFYRRMRKVHGVLMTPEGEPVGGAW
NYDHENRGAFGRQGPGLLPAPPSFPPDAITREVLRDVVQHFGDHYGQCDAFDWPVTRADA
LVALRDFMQHRLQDFGQFQDAMWTGEPFLYHALISAALNLKLLDPREVVAAAVAQYEAGS
APLAAVEGFVRQILGWREFIRGVYWWRMPKLLEANALDHHAPLPDWYWTGEVQMNCMHNA
IGQTLKHGYAHHIQRLMVTGNFALTFGMAPAEVHAWYLSVYVDAVEWVEAPNTLGMALYA
DGARFVTKPYAAGGAYIQRMSNYCKGCRYQPTQRTGDDACPMTVMYWDFVARHAPMLEKN
PRTVMMVKNLARFGADEVAAIRETAQRMRDQPDRL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcacttgcgtcacctcgtgctcgtgctcggcgaccagctgagtgtcgacagc
gcggcgttcgaaggctttgatccgctgtgcgatcgggtgctcatggtcgaggcgcgcgat
gaatccgagcacgtgccgagcacgaagatgcgcacggcggtgttcctctcggcgatgcgg
cacttcgccgaagccgtcacggcgcgcgcctggccgctcgactacctgcggctcggcacg
caccgcttcgacacggtggccgatgcgctcgccgatgcgctggcgcgccaccggcccgac
gcgctggtgatggtcgaggccggcgagtggcggctcgaacaggcgatcgccggctgttgc
gccgaggccggcgtgcgcgtcgacatgcgcgacgatttgcacttcatggcctcgcgccgc
gacttcatcgacgacgcgcgcggcaagcagcgcctcgtgatggaggcgttctaccggcgc
atgcgcaaggtgcacggcgtgctcatgacgcccgagggcgagccggtgggcggggcgtgg
aactacgaccacgagaaccgcggcgcgttcggtcggcaggggccggggctgctgcccgcg
ccgccctcgtttccgccagacgcgatcacccgcgaagtgctgcgcgatgtggtgcagcac
ttcggtgatcactatggacaatgcgatgcgttcgactggccggtcacgcgcgccgacgca
ttggtcgcgttgcgagacttcatgcagcaccggctgcaggacttcggccagttccaggat
gcgatgtggacgggcgagcccttcctgtatcacgcgctgatttcggcagcgctcaatttg
aagttgctcgacccgcgcgaggtcgtcgcggcagccgtcgcgcagtacgaagccggttcg
gcacccctcgctgcggtggaaggtttcgtgcggcagatcctcgggtggcgcgagttcatc
cgcggcgtgtactggtggcgcatgccgaagctgctcgaagccaatgcgctcgatcaccac
gcgccgctgcccgattggtactggaccggcgaggtgcagatgaactgcatgcacaacgcc
atcggccagacgttgaagcatggctacgcgcaccacatccagcggctgatggtcaccggc
aatttcgcgctcaccttcggcatggcacccgccgaggtgcacgcctggtatctctcggtg
tacgtcgatgcggtggagtgggtcgaggcgccgaacacgctcggcatggcgctttacgcc
gacggcgcgcgcttcgtgaccaagccgtatgccgcgggcggcgcctacatccagcgcatg
agcaactactgcaaggggtgtcgctaccagcccacgcagcgcaccggcgacgatgcctgc
ccgatgacggtgatgtactgggacttcgtggcgcgccacgcaccgatgctggagaagaat
ccgcgcacggtgatgatggtcaagaacctcgcccgcttcggcgccgacgaggtggcggcg
atccgcgagacggcgcagcgcatgcgcgaccagccggaccgcctctga
DBGET
integrated database retrieval system
