Variovorax sp. PAMC 28711: AX767_11580
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Entry
AX767_11580 CDS
T04325
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa02010
ABC transporters
vaa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AX767_11580
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AX767_11580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaa02000
]
AX767_11580
Transporters [BR:
vaa02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
AX767_11580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
AMM24929
LinkDB
All DBs
Position
complement(2354079..2355248)
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AA seq
389 aa
AA seq
DB search
MTPFKKLLCVAVLGSAMSVMAAPVKVGIALDVSGPFAALGAEARDGFALAIKQLNGKLGG
QDVEFIQADMAGSPDQAKQLVDRMIQRDKIDLFTGPIGSNIALAVGPTLFAAKVPYLSAN
AGPSQFAGAQCNAYFFGTAYQNDQFHEAAGKFAQDRGFKRTVLIAPNYPAGKDSLVGFKR
QFKGQVAEELYTKLGQIDYAAELAQIRAAKPDSIYFFLPGAMGINFIKQFVGAGLSKDIT
LVTSGFSADEDVIGAVGDPMLGLFNTSHWAHDMDNAANKAFVAAFKKEYNNRYPSLYAAQ
AYDAILAMDAAVKQAGGNAQNREAVIAALKKANYASTRGAFKYANNHYPIENFYLRVIGK
DAQGKITNKTVSTLLTNYGDTYAQNCPLK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgacccctttcaagaaactcctctgcgtggccgttctcggctccgcgatgtccgtcatg
gcggcccccgtcaaggtcggcatcgcgctcgacgtgtcggggcctttcgctgcactcggc
gccgaggcgcgtgacgggttcgcgctggcgatcaagcagctcaacggcaagctcggcggg
caggacgtggagttcatccaggccgacatggcgggcagccccgaccaggccaagcagctg
gtcgaccggatgatccagcgcgacaagatcgacctgttcaccggcccgatcggctccaac
atcgcgctggccgtcggcccgaccttgttcgcggccaaggtgccgtatctctccgccaat
gccggcccgagccagttcgccggcgcgcagtgcaacgcctacttcttcggcacggcctac
cagaacgaccagttccatgaggcggccggcaagttcgcacaagaccgcggcttcaagcgc
acggtgctgatcgcgcccaactatcccgccggcaaggactcgctggtcggcttcaagcgc
cagttcaagggccaggtcgccgaagagctgtacaccaagctcggtcagatcgactacgcg
gccgaactcgcgcagatccgcgcggccaagccggattcgatctacttcttcctgcccggc
gcaatgggcatcaacttcatcaagcagttcgtcggtgccggcctgtcgaaagacatcacg
ctcgtgaccagcggcttctcggccgacgaagacgtgatcggcgccgtgggcgacccgatg
ctcggcctgttcaacacctcgcattgggcgcacgacatggacaacgcggccaacaaggcg
ttcgtcgcggccttcaagaaggaatacaacaaccgctacccgtcgctctacgccgcgcag
gcctacgacgcgatcctcgcgatggacgccgcggtcaagcaggccggcggcaatgcgcag
aaccgcgaagccgtgatcgccgcgctcaagaaagccaactacgcctcgacgcgcggcgcc
ttcaagtacgcgaacaaccattacccgatcgagaacttctacctgcgcgtgatcggcaag
gacgcgcaaggcaagatcaccaacaagacggtcagcacgctgctcaccaactacggcgac
acctacgcgcagaactgccccttgaagtga
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