Variovorax sp. PAMC 28711: AX767_12485
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Entry
AX767_12485 CDS
T04325
Name
(GenBank) diguanylate cyclase
Organism
vaa
Variovorax sp. PAMC 28711
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
dCache_1
dCache_1_like
Motif
Other DBs
NCBI-ProteinID:
AMM25090
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Position
complement(2560392..2561870)
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AA seq
492 aa
AA seq
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MVCVLLLAINAWLIYQTRRTELAQISRANSNLAQAVTAQVEGSIAEVEHVLDNIVFALER
SDLTTDSLQRMQPMLVSQVAAIKQLKGLFVYDAAGRWIVNSEASWDPSRNNADRSYFVHH
RNNPSVRPLISAPIVSRSSGEWIIPVSRRVNDPDGNFQGVVLGTLSVRNLGEFLNKFAIG
QQGAIAVILAGRILVRRPFSEQDLGKRLPASPLQTLFATQPSGTADARSTVDGVQRIISF
EHMQNYPVLVTVAVGKDEALADWESTSIMQTAWVIVLCMMVAGAGTFVIRAIRLRVQAEA
GLRDARDALTEANQRLAHLAQYDELTGLPNRRYFDSRLHRAFREAQRDKHSLAIVMIDVD
QFKQYNDRYGHVEGDHCLQLVADAVQSVARRPYDFVARYGGEEMVMLLPKTDSAGAERVA
EAGRVAVLNLRIRHEASSLGMASISLGVACLTPQAHDMPEDLIRVADAALYKAKREGRNR
VCIDPQPGFAAG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
ttggtctgcgtgttgctcctggcgatcaatgcgtggttgatctaccaaacgcgtcgcacg
gagctggcgcaaatctcccgtgcaaattcaaatctggcgcaagccgtgacagctcaggtc
gaaggctcgattgccgaagtcgagcatgtactggacaacattgtcttcgcgctggagcgc
tctgatctcacaaccgactcgctgcaaagaatgcaaccgatgctggtcagccaggtcgcc
gcgatcaagcagttgaagggtttgttcgtctacgacgcggcgggtcgctggatcgtgaat
tccgaagcgtcctgggatccgtcgcggaacaacgccgatcgaagttacttcgtgcaccat
cggaacaatccaagcgttcggccattgatcagcgccccgatcgtcagccgctcctcggga
gaatggattattccggtctctcgccgcgtgaatgaccccgatggcaattttcaaggcgtg
gtcctcggcaccctcagcgtccgcaatctgggggaatttttgaacaagttcgccatcggt
cagcagggagcaatcgctgtgatccttgcaggccggattcttgtgcggcggcccttcagt
gagcaagacctcggaaagcggctccccgcttcgccgttgcagacccttttcgccacccag
ccatcaggcacagcagacgcacgctcgaccgtcgacggtgttcaacgcatcatcagcttt
gaacacatgcagaactatccggttctggtgaccgttgcagtcggtaaagacgaggctctc
gcggactgggaaagcacttccatcatgcagacggcatgggtcatcgtgctgtgcatgatg
gtggccggggcaggtactttcgtgattcgtgccatccgcctgcgggtccaggcagaagcg
ggcctgcgcgatgcgcgcgatgcactcacagaagcgaatcaacgcctcgcgcaccttgcg
caatacgatgagctgaccggactgccaaacaggcgctacttcgattcaaggctgcaccgt
gccttccgcgaggcgcaacgcgacaagcattcgctggcgatcgtcatgatcgatgtcgat
cagttcaagcagtacaacgaccggtacggccatgtagagggtgatcactgcctccaactt
gtggcagatgcagtgcaatcggtcgcgagacggccgtatgactttgtcgcccgctacgga
ggcgaagagatggtcatgcttttgcccaagacggattcagcaggtgccgagcgcgttgca
gaagccggcagagtggctgttttgaatcttcgcattcgtcatgaggcgtcttcgctgggg
atggcgtcgatcagtcttggtgtcgcttgcttgacgccccaagcccacgacatgcccgag
gacctgatcagagtagccgacgcggctttgtacaaggccaagcgcgagggcagaaacagg
gtgtgcatcgatcctcagccaggattcgcagccggttga
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