Variovorax sp. PAMC 28711: AX767_12710
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Entry
AX767_12710 CDS
T04325
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AX767_12710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaa03400
]
AX767_12710
Enzymes [BR:
vaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AX767_12710
DNA repair and recombination proteins [BR:
vaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AX767_12710
Prokaryotic type
AX767_12710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AMM25131
LinkDB
All DBs
Position
2612319..2613038
Genome browser
AA seq
239 aa
AA seq
DB search
MSALDQLTAADPVQWPVAAGWKALVDVFFADTVGQKLLGFLEERIADGASIFPPQPLRAL
ELTRPEDVRVVILGQDPYHGRGQAEGLAFSVAPGVKVPPSLRNIFKELQRDLGTPPPPFP
LPGGSLVKWATEGVLLLNTCLTVEEAQPASHAGRGWEVLTDAVIRHVASGERPVVFMLWG
ALAQSKRALIDSTRHNVLMANHPSPLSAMRAPVPFIGCGHFGQARAWREARDDVSSLGR
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgctggaccagctcacggcggccgatcctgtgcaatggcccgtggccgcgggc
tggaaggcgcttgtcgatgttttcttcgccgacaccgtcgggcagaagctgctcggcttt
ctcgaagaacgcatcgcggacggcgcgtcgatctttcccccgcagcccctgcgtgcgctc
gaactcacgcgacccgaagacgtgcgggtggtcatcctcggccaggacccgtaccacggc
cgcgggcaggccgaaggcctggcgttttcagtggcgcccggcgtcaaggtgccgccgtcg
ctgcgcaacatcttcaaggagctgcagcgcgacctcggcacgccgccaccgccctttccg
ctaccgggcggaagtctcgtgaaatgggcgacggagggcgtgttgctgctcaacacgtgc
ctcacggtggaagaagcgcagcctgcaagccatgccggccgcggctgggaagtgctgacc
gacgcggtgattcgccacgtcgcgtccggtgagcggccggtggtcttcatgctgtggggc
gcgctcgcgcaaagcaagcgcgcgttgatcgattcgacccgccacaacgtgctgatggcc
aaccatccgtcgccgctgtccgcgatgcgggcgcccgtgccgttcatcggctgcgggcac
ttcggtcaggcgcgtgcctggcgggaggcgcgtgacgacgtttcttcgctgggcaggtag
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