Variovorax sp. PAMC 28711: AX767_12920
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Entry
AX767_12920 CDS
T04325
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
vaa
Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vaa03000
]
AX767_12920
Transcription factors [BR:
vaa03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AX767_12920
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AMM25160
LinkDB
All DBs
Position
complement(2659750..2660664)
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AA seq
304 aa
AA seq
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MNFKHLHYFWAAAKAGGIVRASEQLHITPQTLSGQIKLLEERLGCHLFQKSGRGVELTPE
GRTALSYADQIFSLGAELESALGRHGESGRTLNFRVGIADAVPKSIAYRLLEPALGITEP
VRLICHEGNFRDLLGQLSVQRLDLVIADEAMGKQTSVKAFNHPLGATAMSFFASKGLKES
LKGAFPQCLDGAPMLIQGSSSAVRQRLDLWLAEHGLRPRLIGEFDDAALLKAFGGEGRGV
FMTPTVLEDETCAQYGVEVVGRASELLEEFFAISVERRITHPCVVAITRAARVQFSRRQA
DSLA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaaacaccttcactatttctgggccgcagccaaggccggtggcatcgtgcgt
gccagcgagcagttgcacatcacgccgcaaacgctgtcgggacagatcaagttgctcgaa
gaacgcctgggctgccatttgttccagaagagcggccgcggggtcgagctcacgccagaa
ggccgcacggcgctcagctacgccgaccagatcttttcgctcggcgccgaactcgaaagc
gcgctcggccggcacggcgagagcggccgcacgctgaactttcgcgtcggcatcgcggac
gcggtgcccaagtcgatcgcgtatcgcctgctggagccggcgctcggcatcactgagccc
gtccggctgatctgccacgaaggcaactttcgcgacctgctcggccagctgtcggtgcag
cgactggacctggtgatcgccgacgaggcgatgggcaagcagaccagcgtgaaggccttc
aaccacccgctcggcgcaaccgccatgagcttcttcgcgtcgaaaggcctgaaggaatcc
ttgaaaggtgcatttccgcaatgcctggacggcgctcccatgctgatccagggttcgtcg
tcggcggtgcgccagcgcctggacctctggctcgcggaacacggactgcgcccgcggctc
atcggcgagttcgacgacgccgcgctcttgaaggcattcggcggcgaggggcgcggcgtg
ttcatgacgccgaccgtgctcgaagacgaaacctgcgcgcagtacggcgtggaggtggtg
ggccgggcgtcggaattgctcgaagagtttttcgcgatctcggtcgagcggcgcatcacg
cacccgtgtgtggtcgcgatcacgcgggccgcgcgcgtgcagttctcaaggcgccaggcc
gacagcctcgcctga
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