Variovorax sp. PAMC 28711: AX767_12960
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Entry
AX767_12960 CDS
T04325
Name
(GenBank) circadian clock protein KaiC
KO
K08482
circadian clock protein KaiC
Organism
vaa
Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
AX767_12960
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
RecA
AAA_16
AAA_22
IstB_IS21
PAXNEB
nSTAND3
Rad51
DnaB_C
AAA_29
AAA_33
AAA_24
AAA_7
MEDS
AAA
SLFN-g3_helicase
PhoH
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AMM25167
UniProt:
A0A126ZDS1
LinkDB
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Position
2665790..2667304
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AA seq
504 aa
AA seq
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MVTSLSPFVAPVQPRASTGIAGLDSVLGGGLPRGHLYLLEGSPGAGKTTLGLQFLLEARA
LGERGLYVTLSETADELRIVAGSHGWSLDGVEVFELVTEEGLSPSAEQSILYPSEVELGE
TTRGVMAAVERLNPSRVVFDSLSEMRLLAQDPLRYRRQILALKHFFAARDCTVLLLDDMT
SSGGDLQLHSIAHGVLGLTQVSGAYGPVRRHLRILKMRGVKYRGGEHDVHLDTGGIEVFP
RLIASEHRADFELVSVSTGNAAFDAVLGGGLTRGSNTLFIGPSGVGKTTSAMSCVVAALQ
RGENASYYLFDEGIGTLLQRCEALNLPIRHYIDSGQLQVFPLDPAEVSPGRFSNMVREAV
QEGGARTIVIDSLNAYLQAMPGAQFLLLQMHELLAFLNQQGIVTMLVLGQHGIIGDVRSD
LDLSYLSDSIVLFRFFESQGQLLKAVSVVKSRTHRHELTIREFRLGDGGVEVGPALTDFQ
GVLAGVPSYSGGISLLGATSLEMA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtcacttctctctcgccctttgttgcccccgtgcagccacgcgcatcgaccggcatc
gccggtctcgacagtgttctgggtgggggcctcccccggggccatctctatctgctcgaa
ggttcgccgggcgccggcaagaccacgctgggcctgcagttcctgctcgaagcgcgcgcg
ctcggcgagcgcggcctctatgtgacgctgtcggagacggcggacgagctgcgcatcgtg
gcgggctcgcacggctggtcgctggacggcgtggaggtgttcgagctggtcactgaagaa
gggctcagcccgtcggccgagcagtcgatcctgtatccgtcggaggtggagctcggcgag
accacgcgcggcgtgatggcggcggtggagcggctcaacccgagccgcgtggtgttcgac
agcctctccgaaatgcggctgctcgcgcaggatccgctgcgttaccgccggcagattctc
gcgttgaagcacttcttcgcggcacgcgactgcaccgtgctgctgctcgacgacatgacg
tccagcggcggcgacctccagctgcacagcatcgcgcacggcgtgctcggtctcacccag
gtgagcggcgcctacgggccggtgcggcgccatctgcgcatcctcaagatgcgcggcgtg
aagtaccgcggcggcgagcacgacgtgcacctggacaccgggggcatcgaggtctttccg
cgcctcatcgcgtcggagcatcgggccgacttcgagctggtgtcggtcagcaccggcaac
gccgccttcgatgcggtgctggggggcggcctcacgcgcggcagcaacaccctgttcatc
ggtccgtcgggggtgggaaagaccacctcggccatgtcgtgcgtggtggccgccctgcag
cgcggcgaaaacgcgtcctactacctgttcgacgaaggcatcggcaccttgctacagcgc
tgcgaagcgctcaacctgccgatccggcactacatcgacagtgggcaacttcaggtgttt
ccgctcgacccggccgaggtgtcgccgggccggttttccaacatggtccgcgaggcggtg
caggaaggcggggcccgaaccattgtgatcgacagcctgaacgcctacctgcaggcgatg
ccgggtgcgcagttcctgctgctgcagatgcacgagttgctcgccttcctgaaccagcag
ggcatcgtgacgatgctggtgctgggccagcacgggatcatcggcgacgtgcgcagcgac
ctcgacctgagctacctgtcggattcgatcgtgctgttccgtttcttcgaatcgcagggc
cagttgttgaaggcggtgtcggtcgtgaagagccggacccatcgccacgaactcaccatc
cgcgagttccgcctcggcgacggtggcgtcgaagtcggccccgccctcaccgatttccag
ggcgtgctggccggtgtgccgtcgtacagcggcggcatatcgctgctgggcgcgaccagc
ctcgagatggcctga
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