Variovorax sp. PAMC 28711: AX767_13725
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Entry
AX767_13725 CDS
T04325
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vaa
Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaa03400
]
AX767_13725
Enzymes [BR:
vaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AX767_13725
DNA repair and recombination proteins [BR:
vaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AX767_13725
Prokaryotic type
AX767_13725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMM25301
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All DBs
Position
complement(2831225..2832724)
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AA seq
499 aa
AA seq
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MPPILLAVDKTYPKGLMWFRRDLRVDDNAALYHALRTCRQVLCVFIFDRAILDALPEADR
RVEFIRESLVELEAELKRLGGGLIVRHAVAVDEIASLAHALDVQAVFANRDDEPAALARD
TQVFGALANVGVTFQTFKDQTLFERDEVLTKTGQPYTVFTPYKRAWLAKIEPFFLKAYPS
RGYADALAPPPPSHHAPVPSLKDLGFTKTNLVELEIPTGAQGAAALFDDFFQRIDRYDEA
RNFPAVRGPSYLSVHLRFGTVSIRQLAGIAHQLSLQGDAGATTWLSELIWRDFYFQVLAH
NPHIAEGKSFRPEYDKIVWHHGKHADLLFDAWCNGQTGYPLIDAAMAQINQSGYMHNRLR
MVVASFLCKDLGLDWRRGEAYFATHLNDFELASNNGGWQWASSSGCDAQPYFRIFNPVTQ
SERFDPEGKFIRRYLPQLAKLSNTSIHAPWAATPVELEAAEVKLGENYPKPVIDHAEARE
RTLQRYGVVRGPNAKTPTK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgattttactggccgtcgacaaaacctatcccaagggcctgatgtggttccgc
cgcgacctgcgcgtggacgacaacgcggccctctatcacgccctgcgcacctgccggcaa
gtgctctgcgtgttcatcttcgatcgcgcgatcctcgacgcgctgcccgaagccgaccgg
cgcgtggaattcatccgcgagtcgctggtcgagctggaggccgagctcaagcgtctgggc
ggcggcctcatcgtgcggcatgcggtggcggtcgacgagatcgcctcgctggcgcacgcg
ctcgacgtgcaggccgtgttcgcgaaccgcgacgacgagcctgccgcgctggcgcgcgac
acccaggtgttcggcgcgctggcgaacgtgggcgtgacgttccagacgtttaaggaccag
accctcttcgagcgcgacgaggtgctgaccaagaccgggcagccctacaccgtgttcacg
ccgtacaagcgggcctggctcgcgaagatcgagccgttctttctcaaggcctatccgtcc
cgcggctacgccgatgcgctcgcaccgccgcccccgtcgcatcacgcgccggtgccgtcg
ctcaaggacctcggcttcacgaagaccaacctggtcgaactggaaatccccaccggcgcg
caaggcgcggccgcgctgttcgacgatttcttccagcgcatcgaccgctacgacgaggcg
cgcaacttccccgcagtgcgtgggccgagctacctcagcgtgcacctgcgcttcggcacg
gtgtcgatccgccagctggccggcattgcgcaccagctgtcgctgcaaggcgatgccggc
gccacgacctggctcagcgaactgatctggcgtgacttctatttccaggtgctggcacac
aacccgcacatcgccgaaggcaagagcttccggccggaatacgacaagatcgtctggcat
cacggcaagcacgccgacctgctgttcgacgcctggtgcaacggccagaccggctatccg
ctgatcgatgccgccatggcgcagatcaaccagagcggctacatgcacaaccggctgcgg
atggtcgtggcgagttttctctgcaaggacctggggctcgactggcgccgcggcgaggcg
tacttcgcgacgcacctgaacgacttcgaacttgcatcgaacaacggcggctggcagtgg
gcgagttccagcggctgcgacgcgcagccctatttccgcatcttcaatccggtgacgcag
agcgagcgcttcgatcccgaaggcaagttcatccggcgctacctgccgcagctggccaag
ctgtcgaacacctcgatccatgcgccctgggcggcgacgccggtggaactggaagccgca
gaagtgaagctcggcgagaactatccaaagcccgtgatcgaccacgcagaggcgcgagag
cgcactttgcagcgctacggcgtggtgcgcggaccgaacgccaagacgccaacgaaatga
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