Variovorax sp. PAMC 28711: AX767_14205
Help
Entry
AX767_14205 CDS
T04325
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AX767_14205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaa03400
]
AX767_14205
Enzymes [BR:
vaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AX767_14205
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AX767_14205
DNA repair and recombination proteins [BR:
vaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AX767_14205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DUF5830
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AMM25386
UniProt:
A0A126ZEK2
LinkDB
All DBs
Position
2920141..2920956
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVEVTRLGFADRIAGARITALRVGKPLRWALAVDPETLVGRTVVGVRRRGKYLLV
DLSDGLLMLHLGMSGSLRFTHGLPLPGTHDHFDLVTDLGTLRLNDPRRFGAVVFAADEDA
PIAIKLLGGLGMEPLGDAFDFDVFHAGLRRRQAAIKQVLLAGDVVVGVGNIYASEALFMA
GIRPTVAASRISRPRALRLHAAIREILARAVQRGGSTLRDFSNVDGQSGYFQLEAMVYAR
AGEPCRVCGAPIRQFKQGQRSTFFCAICQKS
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactccccgaagtcgaagtcacccgcctcggatttgccgatcgcatcgcggga
gcgcggatcacggcgctgagagtcgggaaaccactgcgctgggcgctggccgtcgatccc
gagaccttggtcggtcggacggtcgtgggcgtgcggcgccgcggcaaatacctgcttgtc
gacctcagcgacgggctgttgatgcttcatctgggcatgtcgggcagcttgcgcttcacg
catgggttgccgctgcccggcacgcacgaccatttcgatctggtgacggacctgggcacg
ttgcgcctgaacgatccgcgcaggttcggtgccgtggtgtttgccgcggacgaagacgcg
ccgatcgccatcaagctcctcggcgggctgggcatggagccgctcggcgacgcgtttgat
ttcgacgtcttccacgccggcttgcgccgtcgccaggcggcgatcaaacaggttttgctg
gccggtgacgtggtggtcggcgtgggcaacatctatgcgtccgaggccttgttcatggcg
ggaattcggcccacggtggcggcgtcgcgcatcagcaggccgcgtgcgctgcgcttgcat
gcggccattcgcgagatcctcgccagggcggtgcagcgtggcggaagcaccttgcgcgac
ttttcgaacgtcgatgggcagtccggttatttccagctggaagcgatggtctacgcccgg
gctggcgagccttgtcgcgtgtgtggagcgcccatcaggcagttcaaacaggggcagcgc
tcaacatttttctgtgcaatctgccaaaagtcctga
DBGET
integrated database retrieval system
