Variovorax sp. PAMC 28711: AX767_14585
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Entry
AX767_14585 CDS
T04325
Name
(GenBank) SAM-dependent methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
vaa
Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vaa03009
]
AX767_14585
Enzymes [BR:
vaa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
AX767_14585
Ribosome biogenesis [BR:
vaa03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AX767_14585
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
MTS
Methyltransf_31
Ubie_methyltran
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Methyltransf_25
Cons_hypoth95
GCD14
Methyltransf_14
Motif
Other DBs
NCBI-ProteinID:
AMM25448
LinkDB
All DBs
Position
2997142..2998413
Genome browser
AA seq
423 aa
AA seq
DB search
MHPKALLEATTDLVGLVLKFDHPADQVVSRFFREHREFGPRERATLAETVYTVLRKKLLF
DHLSPSGSGSKERRMAILGFYGPRDFLKSALNDTEKRWLDNCDAVKPDDLLDRHRHNLPE
WLVTPLKAQLGDGFWPLVESLQQPAPLDLRVNTLNDKRADVKAELKKAGVPALETPFSPW
GLRIDGKPALNKFDAFARGAVEVQDEGSQLLALILDAKRGEMVVDFCAGAGGKTLAIGAS
MRNTGRLYAFDTSAHRLDALKPRLARSKLSNVHPAAIAHERDDRVKRLAGKIDRVLVDAP
CSGLGTLRRNPDLKWRQSPQSVAELTAKQTAILQSAARLLKSGGRLVYATCSVLPEENEA
IAEAFGAANPDFEPQDAGELLKALKVEGAEGLCAGGETGTRYLRLWTHLHATDGFFAAVW
NRK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcaccccaaagccctgttggaggcgaccaccgatctggtcggcctcgtcctgaaattt
gatcatcccgccgaccaggtcgtttcgcgcttttttcgcgagcaccgtgaattcggccca
cgcgagcgcgccaccctggcggaaaccgtctacaccgtgctgcgcaagaaattgctgttc
gaccacctctcgccctcgggcagcggctccaaggagcggcgcatggcgatcctgggcttc
tacggcccgcgcgattttctgaagagcgcgctcaacgacaccgaaaagcgctggctcgac
aactgcgacgccgtcaagccggacgacctgctcgaccgccatcgccacaacctgccggag
tggctggtcacgccgctgaaggcccagttgggcgacgggttctggccgctggtcgaaagc
ctccagcagcccgcgccgctcgacctgcgggtcaacacgctcaatgacaagcgcgccgat
gtgaaggcggaactcaagaaagccggcgtgccggccctcgagacgcccttttcgccgtgg
ggcctgcgcatcgacggcaagccggcgctcaacaagttcgacgccttcgcgcgcggtgcg
gttgaagtccaggacgagggctcgcaactgctcgcgctgatcctcgacgccaagcgtggc
gaaatggtggtggatttctgtgccggtgccggcggcaagacgctcgcgatcggcgcgtcg
atgcgcaataccggtcgcctgtacgcattcgacacgtcggcgcaccggctcgacgcgctc
aagccgcgcctcgcgcgcagcaagctgtcaaatgtgcatccggccgccatcgcgcacgag
cgcgacgaccgcgtcaagcggctggcggggaagatcgaccgtgtgctggtcgacgcgccg
tgctcggggttgggcaccttgcggcgcaatcccgacctgaaatggcgccagtcgccccag
tcggtggccgaactcaccgccaaacaaacggcgatcctgcaaagcgcagcccggctgctc
aagtcgggcggccgcctcgtgtacgcgacctgcagtgttctgccggaagaaaacgaggcc
atcgcggaagctttcggagcggcgaatcccgatttcgagccccaagatgccggtgagttg
ctcaaggcgttgaaagtggagggtgcggaagggctttgcgccggcggcgaaaccggtacg
cgctacctgcggctctggacccaccttcacgcgacggacggtttctttgccgccgtgtgg
aaccgcaagtag
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