Variovorax sp. PAMC 28711: AX767_15315
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Entry
AX767_15315 CDS
T04325
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AX767_15315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
He_PIG
BapA_N
CshA_repeat
Big_11
HU-CCDC81_bac_2
GspA_SrpA_N
Motif
Other DBs
NCBI-ProteinID:
AMM25575
UniProt:
A0A126ZGK5
LinkDB
All DBs
Position
3159904..3165927
Genome browser
AA seq
2007 aa
AA seq
DB search
MARYERRGDDLVLVLRNGKEVAVQGFFTQYEGEGRNDLVLEDANGVLWWGQYTSPWSEFH
FTEIEWDDIAPLWLPPWLIAGLGVLGLAAAAGGGGGGGGGGGGFIPVPPVANRPPEAPDH
KHTIAEDGVVTGRIGGTDRDGDALKYTLVTPPGHGTLVINPDGSYTFTPEPNYSGPDQFV
VTVDDGKGGTTTSTVVIDITPVNDAPGPVGAIPNQTGADAEGGVNVPTAGGFTDVDGDTL
TYTATGLPPGLTIDPITGVISGTIDPSASTDGPYTVTVTATDPDGESTDQTFTWTVTNPA
PEASDDAATTNEDTPVSGNVLTGAGAGAGDQADTDPDGDALVVTQFQVNGETYTAGATAT
IAGVGTLVLGSDGAYTFTPEANWNGTIPTVTYTISDGEGGTDTAVLAITVNPVIDLVAAD
DSNTTNEDTPVSGTVVTNDSTTSGGTLTFVKETDPANGSVVVNPNGTYTYTPNTNFNGTD
SFTYTVTDANSGESLTRTVNITVNPVVDLAAGDDSAVTNEDTPVTSTVVNNDSTTSGGTL
TFVKATDPANGSVVVNPNGTYTYTPNTNFNGTDSFTYTVTDANSGESLTRTVTITVNPGN
DAPVIVGGAQAGTVVEAGNEDDGTVVNGAPNAGGAFTATDVDSDVANQVWSVVGTPNATY
GNFALNASGAWTYTLDNSLPATQALKEGQEVPLTFTVQVADGNGGTAQQTVTINITGKND
VPVAVADTATVKESGVQNGGNTGEAGAPTAGGNVLTNDTDVDDGEKATLAVSAVGFGGTT
GALGAALSGTYGSLVLNANGTYTYTLDNSLPATQQLAQGASATEVFSYTTVDAFGASSTS
TLTVTVTGTNDQPLITSNAASALGIVTEQGTVNPSAVSTVSGTLTASDADTGATQAWSIP
GTLNGVYGTISINATTGVWTYTLDNTRPATQALNDGDNPTEEFTARVIDQHGAFSDQVIT
VTVNGSNDDVTGVNAVVLLLEDPSGGAQTGTLQIYVSDPDDVIELVSFTVAGQATTHQPG
DVVIIDGVGALTIALNGDYVFTPLPNYSGAVPVITYTMVEVEGGQPITQTLTFQITPVSD
APNMADDKALVVNEDASIALALTVPVITDNTDQNGTGTGDAPERLGAITLTAGGAGAAGA
TFTTTINGTPTTLAPVGGVIKIVITDTAGSTTPSSLHVTGDATLVPTAGTAGVYYLTATE
YAAITAQPAAETHQNFTVTVGATSYEVNAAGVKIPAVAGASSSQVVTVDVQAVTDGATLA
ISSSNPPAFAEDTTINLSTYLTATLASTDANGGNDTDGSETYWYTVDGLPPGTVVNINGA
DYTANGTGMVTSAASATFTAPPSITIKPPANFSGQINGITITLNSKDIDGDSIHIPTTVT
SAVTLDLVVTPVAGDVAVDPATTAEDTAVAFLAGVRVTDTGTNGTEVINSVSFDVPTGWT
LTTIPTVTGMTVTGGPTGSVAITFTGMNQADIEAALDGFRILPPAHSSADVNITLSIVTT
DTNGTGTSTVTSTPTLKITVTPVAEQVETDSDGANGNDVTINGDHPYGTAGAEDQWFALG
TNATDATGGGWTGLGAPGVWTNEDPDESTFAVLTPVLSSGTTGETASGSVFRYYDGTTWH
SVTYTTGSPAWIPSRFLDTLQFKAPPNVSGTFNIAVQAGTVDYDDDSTAVVDPLNPPTVS
GPGVSVAVSGTALLSTIKIDPVADPVTMAVNGRASGLEDTDIALVIRTTSVDPSETFNVT
IAAIPVGATITYGSGTGAITFTATTGQTSFTIQNFNNAAPMSIKPPLNSNVDFALNVTAV
SVDGASTSAPAATRAIQVSVEGVADEATVTLTPAKIYTEAQLDAGTTVIKLSDLVTNVVT
PDADGSETVSVRITGLPEGFTLTGATLLQGGTGTERVWTLPATQMGNVEIKAPANYSGPV
TLQVAGVTTENDGDSRTGTPVAVSFTVTPSAEAPRPPAPRWWRTCSSRWIWGSFSRTVTP
TRNWAECSSRSAQPRGRDTFCTLAINQ
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
gtggccaggtacgagcgccgcggcgacgacttggtcctggtgttgcgcaacggcaaagaa
gtcgctgtgcagggcttctttacccagtacgagggcgaaggtcgcaacgatctcgttctg
gaagacgcgaacggcgtcctgtggtgggggcagtacacctcgccgtggagcgaattccat
ttcaccgagatcgaatgggacgatatagccccgctgtggctgccgccctggctgatcgcc
ggcctgggtgtgctgggtctggcggccgccgcgggcggtggcggtggcggcggtggtggc
ggaggcggcttcattccggttccgcctgtggccaatcgcccgcccgaggcgccggaccac
aagcacaccatcgccgaagacggcgtggtcacgggccgcattggcggcaccgaccgcgac
ggcgacgcgctcaagtacacgctcgtcacgccgccgggccacggcacgctggtcatcaac
cccgacggcagctacaccttcacacctgaacccaactacagcggtcccgaccagttcgtc
gtgaccgtggacgacggtaagggcggcacgaccaccagcacggtggtaatcgacatcact
cccgtgaacgatgctccggggcccgtgggtgcgatcccgaaccagacaggtgcagacgcg
gaaggcggcgtcaatgtacccaccgccggcgggttcaccgacgtggacggcgatacgctg
acttacaccgccacgggcctgccgcccgggctgaccatcgaccccatcacgggcgtgatc
agcggcacgatcgacccttcggccagcacggatggcccgtacaccgtgacggtgacggcg
accgacccggacggcgagagcaccgaccagaccttcacttggacggtgaccaatccggcg
ccagaggccagcgacgacgcggccacgaccaatgaagacacacccgtcagtggcaacgtc
ctgaccggcgccggcgccggcgccggcgaccaagccgatacggaccccgatggcgacgcg
ctggtggtgacgcagttccaagtgaatggagagacttacaccgcgggcgctacggccacg
atcgcaggcgtcggcacgctggtgctgggcagcgacggcgcctacactttcacgcctgaa
gccaactggaacggcaccataccgacggtgacctacacgatcagcgacggcgagggcggc
acggacacagctgtcctggccatcaccgtcaacccggtgatcgacctggtggcggccgat
gacagcaacaccaccaacgaagacacgccagtcagcggtacggtggtgaccaacgacagc
accaccagcggcggcacgttgacttttgtcaaggaaaccgacccggcaaacggctcggtg
gtcgtgaacccgaacggcacttacacctacacgcctaacaccaacttcaacggcaccgac
agcttcacctacacggtgaccgatgccaattcgggcgaaagcttgacccggacggtgaac
atcaccgtcaacccggtggtcgaccttgcggcaggcgacgacagcgctgtcaccaacgaa
gacacgccggtcaccagcacggtggtgaacaacgacagcaccaccagcgggggcacgctg
accttcgtcaaggcaaccgacccggcaaacggctcggtggtcgtgaacccgaacggcact
tacacctacacgcctaacaccaacttcaacggcaccgacagcttcacctacacggtgacc
gatgccaattcaggcgaaagcttgacccggacggtgacaatcaccgtcaacccgggcaac
gacgcgcccgtgatcgtcgggggcgcgcaggccggcacggtggtcgaggccggcaacgaa
gatgacggcacggttgtgaacggcgcccccaatgccgggggtgccttcacagccaccgac
gtcgacagcgacgtcgcaaatcaggtctggtctgtggtgggcacgcccaacgccacctat
ggcaacttcgccctcaatgcgtccggcgcctggacatacacgctggacaacagcttgccc
gcaacccaggcgctcaaagaaggccaggaagttcccttgacgttcacggtccaggtggcc
gacggcaacggcggcacggcgcagcagactgtgaccatcaacatcaccggaaaaaacgat
gtgcctgtggcggtggccgacacggccacggtcaaggaatcgggtgttcaaaacggcggc
aacacgggtgaagccggcgcgcctacagccggcggcaacgtgctgaccaacgacaccgac
gtggacgatggcgagaaggccacgctggccgtctcggcggtgggcttcggtggcacgacc
ggcgctctgggtgccgcactgtcgggcacctacggaagcctggtgctcaatgccaacggc
acgtacacatacacgctggacaacagcctgcccgccacgcagcaactggcgcagggcgcc
agcgcgacggaagtgttcagctacaccaccgtggacgcgttcggtgccagcagcaccagc
acgctgaccgtgacggtcacgggcaccaatgaccagccgctcattacatccaatgcggcc
tccgcgctggggattgtgacggagcaagggactgtcaacccaagtgccgtatccaccgtc
agcggtacgctgacagcgagcgatgcagacacgggcgcgactcaggcctggagcatcccg
ggtaccttgaacggcgtctacggcacgatcagcatcaacgcgaccacgggcgtgtggacc
tacacgctggataacacccgccctgccacgcaagcactcaacgatggcgacaacccgacg
gaagaatttaccgcccgcgtgatcgaccagcacggcgcctttagcgatcaggtcatcacc
gtcaccgtgaatggcagcaatgacgacgtgaccggggtaaacgccgtcgtcctcttgctg
gaagacccgtcaggcggcgcccaaaccggtacgctccagatttacgtgtccgatccggac
gacgttatcgaattggtgagctttacggtcgctggccaagccacgacccatcaaccaggc
gatgtcgtgatcatcgacggcgtgggcgcattgaccatcgccctcaacggtgactacgtc
ttcaccccgctgcccaactactcgggcgcggtgccggttatcacctacacgatggtggag
gtcgagggtggccagccgatcacccagacgctaaccttccagatcacgccggtgtccgac
gcaccgaacatggctgacgacaaagcgctcgtcgtcaacgaagacgcgtccattgcgctg
gccctcacggtgccggtcatcaccgacaacaccgaccaaaacggaacaggcacgggcgac
gcaccggaacgcctgggggccatcacactcacggcgggcggcgctggcgcagcgggtgcg
accttcaccaccaccatcaacggcacgccgaccacgctggcgccagtgggcggggtgatc
aaaatcgtcatcaccgacaccgccggctcgaccacgccgagcagcctgcacgtgaccggc
gacgccactctggtgcccacggccggcaccgctggcgtttactacctgaccgcaactgag
tacgcggcgatcacggctcaaccggcagcagagacccatcagaacttcaccgtcaccgtt
ggcgcaaccagctacgaagtcaatgccgcgggcgtcaagattccggccgtggccggcgcg
tccagctctcaggtcgtcaccgtcgacgttcaggcggtcaccgacggagcgacgttggcc
attagcagcagcaacccgccggcgtttgccgaagacacgacgatcaacctgtcgacctat
ctgaccgccacgctggcgagcaccgatgccaacggcggcaacgacaccgacggcagcgaa
acctactggtacaccgtcgatggcctgccgcccggaacggtcgtcaacatcaatggcgcc
gactacaccgccaacgggacaggcatggtgacgtccgcggccagcgccaccttcacggcc
ccgccgagcatcaccatcaagccgccagccaatttcagcgggcagatcaacggcatcacg
atcacgctgaattcgaaggacatcgacggcgattcgattcacatccccaccaccgtcacc
agcgccgtcacgctggatctcgtcgtcacgccggtggccggcgacgtggcggtcgatccc
gcgacaactgctgaagacacggccgtggccttcctggccggcgtgcgggtgaccgacacc
ggaacgaacggcactgaggtcatcaactcggtgtcgttcgatgtgcccacgggctggacg
ctgacgacaatcccgaccgtcaccggcatgactgtgaccggtggacccaccggctcggtg
gccatcaccttcacgggcatgaaccaggcggacatcgaagcggcgctcgacggcttcagg
atcctgccgcctgcccacagcagcgcggatgtaaacatcaccctcagcatcgtcaccacc
gacaccaacggcaccggcaccagcacggtcaccagcaccccaacgctgaagatcaccgtc
acaccggtggcggagcaagtggaaacggacagcgatggtgccaacggcaacgacgtcacc
atcaatggcgaccacccctacggcactgctggcgcggaagaccagtggttcgcactgggc
accaatgccaccgacgccacgggtggtggttggacaggcctgggagcaccgggtgtatgg
accaacgaggaccccgacgagtccaccttcgccgtcctcacgccggttctgagttcgggc
acgactggcgaaaccgccagtggctccgtgttccgctactacgacggcacgacatggcac
agcgtgacctacaccacgggttcaccagcgtggattccgtcgcggttcctggacacgttg
cagttcaaggccccacccaatgtgtcgggtaccttcaacatcgcggttcaggccggcacg
gtggactatgacgatgacagcacagctgtcgtcgatccgttgaacccaccgaccgtcagc
gggcccggcgtgagcgtcgcggtcagcggcactgcgttgttgagcaccatcaaaatcgac
cctgtcgccgaccccgtgaccatggctgtgaacggccgtgccagcggcctggaagacacc
gacatcgcgttggtgatccgcaccacaagcgtcgacccgtcggagacgttcaacgtaacc
atcgccgctattccagtgggcgcgacgatcacctatggctcgggtacaggtgccattacc
ttcacggcgaccacaggccaaaccagcttcacgatccagaatttcaacaacgcggcaccg
atgagcatcaagccgccgctgaacagcaacgtggacttcgcgctgaacgtcacggccgtt
tcggtggacggcgcttcgacatcggcgcctgcggccacccgagccatccaggtcagcgtg
gaaggcgtggccgacgaagccacggtgaccctcaccccggcgaaaatctacaccgaggcg
cagctggatgctggcaccaccgtcatcaagctgtcggatctggtgaccaacgtggtgacc
cctgatgccgatggttcggaaaccgtgagtgtgcgcatcaccggcctgccggaaggcttc
acgctgacgggtgcgaccctgttgcagggtggcactggcaccgagcgcgtgtggacgttg
cccgccactcagatgggcaatgtcgagatcaaggcacccgccaattacagcgggcccgtc
acgctgcaggttgccggtgtcaccaccgagaacgatggcgattccaggactggcacgccg
gtggctgtcagcttcaccgtcacgccgtccgctgaagcaccgcgaccaccagcgccacgc
tggtggaggacgtgctcaagccgctggatttggggatcgttcagcagaacggtgacgccg
acgaggaattgggccgagtgttcatcgcggtcggcgcagccacggggccgggatacgttc
tgtactttggcaatcaaccaatag
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